Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq104 255 7e-63
seq476 122 1e-22
>seq104
Length=83277
Score = 255 bits (282), Expect = 7e-63
Identities = 1317/2066 (64%), Gaps = 51/2066 (2%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||| || || || || || || | | ||||| |||||||||||||| || || |||
Sbjct 46746 GTGAACTGGATAGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGA 46805
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCTGCTAT 52926
|| || |||| || ||||||||||| || | || || | || || | ||
Sbjct 46806 CCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTC-AT 46864
Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986
||||| ||||| |||||| |||||| ||||| || || | ||| |||||||| | |
Sbjct 46865 GTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGAC 46924
Query 52987 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 53046
||| || ||||| || ||||||| || || |||| ||| ||||| ||||||
Sbjct 46925 GATGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGAAT 46984
Query 53047 GTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 53103
|||| | || || || |||||||| || | || || | ||||| || | |||
Sbjct 46985 ATTTGGAACATTTTGGATTGATCCACCGTCAGCAATGATACGGTTCTTCATGTTATCGGA 47044
Query 53104 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 53163
||| | | | || | | | |||| || || || || || || || |||||
Sbjct 47045 CCAGAGTCCCATATCAACAAGATCCTTAAGAAGCCATGGGTTGACAACCTGGAACTCTCC 47104
Query 53164 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 53223
|| | || | |||| || || || |||||| || || | |||| || ||
Sbjct 47105 AGCAAGGACACGTCGAGAATATATGTTGGAGGTATATGGCTCGAAGCACTCGTTGAAACC 47164
Query 53224 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283
| ||| ||| || ||||| |||||||| || || | ||||| || | | ||
Sbjct 47165 AAGAATCTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGATGCC 47224
Query 53284 GTATGTTCTG-ATTTTATCTTTTAGAGGTT-CCCAATTCCAAAGATCCGACGGTACAACN 53341
|| ||| | | | | | || || | |||||| ||||||||| | ||| |||
Sbjct 47225 GT--GTTGAGCAATCTGTTGCTTCAAGCTAGCCCAATCCCAAAGATCGGTAGGTGTAACA 47282
Query 53342 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 53401
||| || || || ||| || ||| ||||| || |||
Sbjct 47283 CCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTATGTCTCATAT 47342
Query 53402 GGTCCTTCCTTCTCAGCTAGTTC-AC--AACTCGCCTCTAATGCACCGTAATAAATGGTT 53458
|| || | | | || | || || || | | || ||| ||| |||||||||
Sbjct 47343 GGACCATGAATTTTTGCCAACTCCACGGAAGCAGTC---AAAGCAGCGTGGTAAATGGTT 47399
Query 53459 TCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG 53517
|||||||| | | || || | |||| ||||| | || || ||| | |||||
Sbjct 47400 TCGAAGATTTGGATGTTAAGGTGCTTG-GCTTCTGGAGACTCGAAAGGA-AGGCGAAGAG 47457
Query 53518 AATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 53576
| || || || || | ||||||||||| | | | |||||||| || | ||| |
Sbjct 47458 CCAAGAAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAATT-G 47516
Query 53577 AGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635
|||| || || |||| || ||||| || | ||| ||||| ||||| | ||| ||
Sbjct 47517 CTCTTTCTTGCCTCAGGAACTGGGTAATAGTTGACATCGATAATCTTATTCAAGTTCTTG 47576
Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATTGTCCATCTATTA--CA 53692
|| | ||||| | || || | || || | || ||| || || | ||| | ||
Sbjct 47577 ACGACTACTTGGCAGACCTCGTGGAGCTTTTGGAAGTCATAAGTGGCAGTCTTCTCGTCA 47636
Query 53693 A-ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 53749
| | ||||| | |||| ||||||| ||| ||||| || ||||||| | | | ||
Sbjct 47637 ACATATGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGG-TGCACA 47695
Query 53750 -TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 53808
|| | | ||||||||||| | || | |||||| || | ||| | ||| ||
Sbjct 47696 GTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGGTT 47755
Query 53809 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGA 53868
||||||| ||| || |||||||| ||||| ||||| || | || || ||| |||| |
Sbjct 47756 ACTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTCTGAGC 47815
Query 53869 TTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT---TTC 53925
|| | || | | ||| | | || || || | ||| | ||| |||
Sbjct 47816 CTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGATGCTC---TTGCGACCCTTGCCTTC 47872
Query 53926 TCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGG 53985
|||||| |||||| || |||||||| || | || | | ||||||||||
Sbjct 47873 AGACTCGTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGGCCAATCCAGG 47932
Query 53986 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 54045
||| || | || |||||||| | ||| || || | | || || ||||| |||||
Sbjct 47933 ACACTCGTTGGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAAGAG 47992
Query 54046 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105
||| || ||||| ||||| || ||||| | || | | ||||| ||||| ||
Sbjct 47993 ATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTT 48052
Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165
|||| ||||| |||||| | | || ||| | ||||| || || | ||| |||| |
Sbjct 48053 CTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCATGGCTCAAGGTAGATGGCGAA 48112
Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225
| | ||||| || ||||| || || ||||| | |||||||||||||| || ||||||
Sbjct 48113 AGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTAGCGGTGTTGTTGAAAACTCG 48172
Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285
| ||| |||| ||| || ||||| || || || || | ||||| || | ||
Sbjct 48173 AAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCCGCAATATAAGCACCCGTCGC 48232
Query 54286 ACGAATATTACTA--ATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCAT 54343
||| || | | |||| ||||| || || || || | || || || | || ||
Sbjct 48233 ACGGATTCTGTGAACATTG--AGACCGATACCACCAGCGTTCTTTGAAATCATGGCACAA 48290
Query 54344 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 54403
||| || || || ||||| || || || || || ||| |||||| | || || |||
Sbjct 48291 ATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGCAG 48350
Query 54404 CTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 54462
|| | || ||| | | || || || || | || || || ||||| || ||
Sbjct 48351 GATGAAAGTT-GTGCCTGTGGTGTACCAGCTGCGAAGAGTGTGGGGGAGGCGTGGGTGAA 48409
Query 54463 CCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAAT 54522
|||| || | | ||||| |||||||| || | || |||||| || ||
Sbjct 48410 GTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCGCCGTGGAT 48469
Query 54523 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 54582
||| || || || ||||| | ||| || || || | |||| ||||||| | |
Sbjct 48470 TCCGACAGCAACGCGCATAATCATATGTTGTGGACGTTCACAGATCTTGCCATCGAGGCG 48529
Query 54583 CAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 54640
|| | || ||| || | || || ||||| || || | ||| ||||| || ||
Sbjct 48530 GAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCACGG 48587
Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAAT 54699
||||| | |||| | |||||||| | ||| || || |||| ||| ||| | |
Sbjct 48588 TCGTAGACAATAGCGGAGTTGAGCTCGGCCTCATGCTTCATAACACAATCGTATGTT--T 48645
Query 54700 ACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCT 54758
||| || || || || | || ||| |||| |||||||||| |||| ||
Sbjct 48646 GTTTGCTGATCATGGGCGACAATCTCTTGTTTCTAGGGTTGACATAGTGGTATAATTCGG 48705
Query 54759 TCATCACTTCACTA-AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 54817
|| || | | | ||| | || || |||| ||||| ||||| || || || |||||
Sbjct 48706 AGATGAC-GCTCGAGAATTGCTTCTTGGTTTGCTTGTGGAGATTCGAAACTGCAATTCTT 48764
Query 54818 GCGGCTAGAATGGCATAATCCGGATG 54843
|| || || ||||||||||| || ||
Sbjct 48765 GCTGCGAGGATGGCATAATCGGGGTG 48790
>seq476
Length=308794
Score = 122 bits (134), Expect = 1e-22
Identities = 338/515 (66%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| ||| | ||||| || ||||| || ||||| || ||| | | || || ||
Sbjct 12084 TTTTGGTAATCAGCAACACGCTTCTCGAAGAAGTTAGTCTTTCCTGCAAGAGAGATGTTC 12143
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
||||| || ||| |||| |||| ||| || || | ||| | | | || | |||||
Sbjct 12144 TCCATAAAGTCGAATGGGTTGGCAACCTTGTAAAC-CTTCTCATTGCCGAG--AGAAAGG 12200
Query 23964 AAT---CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATA 24020
| | ||| ||||| ||||| || ||| ||||||| | ||||| || | |
Sbjct 12201 AGGAGACGATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGA 12260
Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
|| | ||||||||| | || | || ||||| ||||| || || || || ||
Sbjct 12261 AGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATG 12320
Query 24081 ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140
| | |||| | | | || || ||| | || || || | | ||||||
Sbjct 12321 ACGGCCTGGACTGCTGCCTTGCTTGGGCGATGCTTCAAGTGAGAGAAGAGAAGGCATGCG 12380
Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200
|| ||| ||| |||||||| || | || || |||||||| || || || || | |
Sbjct 12381 AAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCC 12440
Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260
|| ||||||||||| || | ||| || ||||| || || || ||| ||||| || ||
Sbjct 12441 ATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGATACCC 12500
Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCAC 24317
|| || || |||||||||| ||| | || || | | | |||| || |||||
Sbjct 12501 TCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGATTCCTTGTCTTGGATCCAT 12560
Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352
|||||||||||| ||||| || | |||||
Sbjct 12561 CGGACAGCCCAATCGGCTTTCTTCTTGATGCAAGG 12595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593717859553920
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