Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 2e-11 >seq57 Length=701840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97045 AGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCA 97104 || ||||||| |||| | ||||| || ||||| || | ||| || |||| || Sbjct 622589 AGCGCATCAACATGATCCTTATAAACATGTGCATCCCCCATAGTATGTGTAAACGTCCCT 622648 Query 97105 GGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTA 97164 ||||| |||||| ||||| || | |||| |||||||| | ||| || ||||| ||| Sbjct 622649 GGAACCAAATCACACACATGAGCCAGCATATGTGTTAATAGCGCATAACTTGCAATATTA 622708 Query 97165 AAAGGCACCCCTAGTCCCATATCA 97188 || || || || |||||||||||| Sbjct 622709 AACGGAACACCAAGTCCCATATCA 622732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781869879280