Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq18 93.3 6e-14
>seq18
Length=186891
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||||||| | ||||| | || ||||| ||||| || | || |||| |
Sbjct 167450 ATGCAAATATTTGTCAAGACTTTGACGGGCAAGACTATTACATTGGAAGTTGAGTCTTCG 167509
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| |||| | || || || || ||||| || ||||| ||||| || |||
Sbjct 167510 GACACAATTGATAATGTCAAGTCAAAGATCCAGGATAAGGAGGGTATTCCACCAGACCAA 167569
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || || || ||||| |||||| | || ||| | ||||| ||
Sbjct 167570 CAGCGATTGATTTTCGCCGGCAAGCAATTGGAGGATGGCCGTACACTCAGCGATTACAAC 167629
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747
|||||||| || ||| |||| |||||
Sbjct 167630 ATTCAAAAGGAGAGCACTCTGCACTTGGT 167658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755451240627200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |