Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq18 152 4e-32
>seq18
Length=186891
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| ||||||||||| ||||||||||| ||| | ||| || | || |||
Sbjct 167658 ACCAAGTGCAGAGTGCTCTCCTTTTGAATGTTGTAATCGCTGAGTGTACGGCCATCCTCC 167599
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| ||| || |||||||| ||||| ||||||||||| || || | ||||||||| |||
Sbjct 167598 AATTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATACCCTCCTTATCCTGG 167539
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | ||||| | ||| || |||| ||||| ||||||
Sbjct 167538 ATCTTTGACTTGACATTATCAATTGTGTCCGAAGACTCAACTTCCAATGTAATAGTCTTG 167479
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||| |||||| ||||| ||||||||
Sbjct 167478 CCCGTCAAAGTCTTGACAAATATTTGCAT 167450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072773250584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |