Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq476 87.8 1e-12 >seq476 Length=308794 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| | |||||||| |||||||| || || | || ||| || || || |||| Sbjct 12527 ACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCTCTTTCGCCTCCAT 12468 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 |||||| ||||||| ||| |||||| | || | | || |||||||||||||| Sbjct 12467 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 12408 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||||| || ||||| ||| ||||| || || Sbjct 12407 CCGTGATGAGGGTCTCCACACCGACTTCGCATG 12375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231411835112