Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq104 318 8e-82
seq476 122 1e-22
>seq104
Length=83277
Score = 318 bits (352), Expect = 8e-82
Identities = 1335/2067 (65%), Gaps = 53/2067 (3%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||| || || || || || || | | ||||| |||||||||||||| || || |||
Sbjct 46746 GTGAACTGGATAGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGA 46805
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 78836
|| || |||| || |||||||||||| || | || || | || || | ||
Sbjct 46806 CCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTC-AT 46864
Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896
||||| ||||| |||||| |||||| ||||| || || | ||| |||||||| | |
Sbjct 46865 GTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGAC 46924
Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956
||| || ||||| || ||||||| || || |||| ||| ||||| ||||||
Sbjct 46925 GATGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGAAT 46984
Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013
|||| | || || || |||||||| || || || || | ||||| || | ||
Sbjct 46985 ATTTGGAACATTTTGGATTGATCCACCGTCAGCAATGATACGGTTCTTCATGTTATCGGA 47044
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| | | | || | | | |||| || || || || || || || |||||
Sbjct 47045 CCAGAGTCCCATATCAACAAGATCCTTAAGAAGCCATGGGTTGACAACCTGGAACTCTCC 47104
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
|| | || | |||| || || || ||||||||| || | | || || ||
Sbjct 47105 AGCAAGGACACGTCGAGAATATATGTTGGAGGTATATGGCTCGAAGCACTCGTTGAAACC 47164
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
| ||| ||| || || ||||||||||| || || | ||||| || | | ||
Sbjct 47165 AAGAATCTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGATGCC 47224
Query 79194 GTAT-GATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252
|| | || | | | ||| || | |||||||||||||||| | || ||||
Sbjct 47225 GTGTTGAGCAATCTGTTGCTTCAAGCTAG-CCCAATCCCAAAGATCGGTAGGTGTAACAC 47283
Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAG 79312
||| | |||||||| || || || || ||| ||| |||||| ||||| |
Sbjct 47284 CCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTATGTCTCATATG 47343
Query 79313 GTCCTTCCTTTTCGGCTAATTC-AC--AACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369
| || | ||| || || || || || | | || || ||| ||||||||||
Sbjct 47344 GACCATGAATTTTTGCCAACTCCACGGAAGCAGTC---AAAGCAGCGTGGTAAATGGTTT 47400
Query 79370 CGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGA 79428
|||| || | | || || | |||| |||||| | || || ||| | |||||
Sbjct 47401 CGAAGATTTGGATGTTAAGGTGCTTG-GCTTCTGGAGACTCGAAAGGA-AGGCGAAGAGC 47458
Query 79429 ATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| || || || || | ||||||||||| | | | |||||||| || | ||| |
Sbjct 47459 CAAGAAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAATT-GC 47517
Query 79488 AATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546
|||| || || |||| || ||||| || | ||| ||||| ||||| | ||| |||
Sbjct 47518 TCTTTCTTGCCTCAGGAACTGGGTAATAGTTGACATCGATAATCTTATTCAAGTTCTTGA 47577
Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTATTA--CAA 79603
| | ||||| | || || | || || | || ||| || | | ||| | |||
Sbjct 47578 CGACTACTTGGCAGACCTCGTGGAGCTTTTGGAAGTCATAAGTGGCAGTCTTCTCGTCAA 47637
Query 79604 -ACATGTTC--AACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA- 79659
| ||||| | || | ||||||| ||| ||||| || ||||||| | | | ||
Sbjct 47638 CATATGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGG-TGCACAG 47696
Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719
|| | | || |||||||| | ||| | ||||| || | ||| | ||| |||
Sbjct 47697 TACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGGTTA 47756
Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779
|||||| ||| || |||||||| ||||| ||||| || | || || ||| ||||||
Sbjct 47757 CTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTCTGAGCC 47816
Query 79780 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT---TTCT 79836
|| | || | | ||| | | | || || || | |||| | ||| |||
Sbjct 47817 TCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGATGCT---CTTGCGACCCTTGCCTTCA 47873
Query 79837 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896
||||||| ||| || ||||||||||| || | || ||| | |||||||||
Sbjct 47874 GACTCGTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGGCCAATCCAGGA 47933
Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGA 79954
|| |||| || |||||||| | ||| || | || ||| || || ||||| ||||
Sbjct 47934 CACTCGTTGGGGCACATCAATGTCCAGTCAAGGT--TCTTTTCAACACGCTTCATGAAGA 47991
Query 79955 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 80014
|||| || ||||| ||||| || ||||| | || | | |||||| ||||| |
Sbjct 47992 GATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGT 48051
Query 80015 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 80074
||||| ||||| |||||| | | || ||| | ||||| || || | ||| ||||| |
Sbjct 48052 TCTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCATGGCTCAAGGTAGATGGCGA 48111
Query 80075 TAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 80134
| | || || || ||||| || || ||||| | |||||||||||||| || ||||||
Sbjct 48112 AAGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTAGCGGTGTTGTTGAAAACTC 48171
Query 80135 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGG 80194
| ||| |||| ||| || ||||| | || || || || | ||||| || | |
Sbjct 48172 GAAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCCGCAATATAAGCACCCGTCG 48231
Query 80195 CACGAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252
|||| || | | |||| ||||| || || || || | || || || | || ||
Sbjct 48232 CACGGATTCTGTGAACATTG--AGACCGATACCACCAGCGTTCTTTGAAATCATGGCACA 48289
Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312
||| || || || ||||| || || ||||| || || |||||| | || || ||
Sbjct 48290 AATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGCA 48349
Query 80313 GCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 80371
| || | || ||| | | || || || || | || || || ||||| || |
Sbjct 48350 GGATGAAAGTT-GTGCCTGTGGTGTACCAGCTGCGAAGAGTGTGGGGGAGGCGTGGGTGA 48408
Query 80372 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAA 80431
| |||| |||| | ||||| ||||| || || | || |||||| || |
Sbjct 48409 AGTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCGCCGTGGA 48468
Query 80432 TTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 80491
|||| || || || ||||| | ||| || || || | |||| ||||||| || |
Sbjct 48469 TTCCGACAGCAACGCGCATAATCATATGTTGTGGACGTTCACAGATCTTGCCATCGAGGC 48528
Query 80492 TCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 80549
| | || ||| || | || || ||||| || || | ||| ||||| || ||
Sbjct 48529 GGAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCACG 48586
Query 80550 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTGA 80608
||||| | |||| | |||||||| | ||| || || |||| ||| ||| |
Sbjct 48587 GTCGTAGACAATAGCGGAGTTGAGCTCGGCCTCATGCTTCATAACACAATCGTATGTT-- 48644
Query 80609 TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 80667
| ||| || || || || | || ||| |||| || ||||||| | |||| ||
Sbjct 48645 TGTTTGCTGATCATGGGCGACAATCTCTTGTTTCTAGGGTTGACATAGTGGTATAATTCG 48704
Query 80668 TCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 80726
|| || | | | ||| | || || |||| |||||| ||||| || || || |||||
Sbjct 48705 GAGATGAC-GCTCGAGAATTGCTTCTTGGTTTGCTTGTGGAGATTCGAAACTGCAATTCT 48763
Query 80727 GGCGGCTAAAATGGCATAATCTGGATG 80753
|| || | ||||||||||| || ||
Sbjct 48764 TGCTGCGAGGATGGCATAATCGGGGTG 48790
>seq476
Length=308794
Score = 122 bits (134), Expect = 1e-22
Identities = 337/515 (65%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| | ||||| || ||||| || ||||| |||||| | | || || ||
Sbjct 12084 TTTTGGTAATCAGCAACACGCTTCTCGAAGAAGTTAGTCTTTCCTGCAAGAGAGATGTTC 12143
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
||||| || || || || |||| ||| || |||| || | | || | |||||
Sbjct 12144 TCCATAAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAG---AGAAAGG 12200
Query 49789 AAT---CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 49845
| | ||| ||||| || || || ||| ||||||| | ||||| || | |
Sbjct 12201 AGGAGACGATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGA 12260
Query 49846 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 49905
|| | ||||||||| | || | || ||||| ||||| || || || || ||
Sbjct 12261 AGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATG 12320
Query 49906 ATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 49965
| | || | | | | || || ||||| || || || | | ||||||
Sbjct 12321 ACGGCCTGGACTGCTGCCTTGCTTGGGCGATGCTTCAAGTGAGAGAAGAGAAGGCATGCG 12380
Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025
|| ||| ||| |||||||| || | || | |||||||| || || || || | |
Sbjct 12381 AAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCC 12440
Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085
|| ||||||||||| || | ||| || ||||| || || || ||| |||||||| ||
Sbjct 12441 ATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGATACCC 12500
Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCAC 50142
|| || || |||||||||||||| | | || | | | | |||| || |||||
Sbjct 12501 TCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGATTCCTTGTCTTGGATCCAT 12560
Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177
|||||||||||| ||||| || | |||||
Sbjct 12561 CGGACAGCCCAATCGGCTTTCTTCTTGATGCAAGG 12595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264274906560
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