Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq18 131 1e-25
>seq18
Length=186891
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || | | |||||| || | ||||||||||||||| | |||||||||
Sbjct 167676 CCTCCACGAAGGCGAAGCACCAAGTGCAGAGTGCTCTCCTTTTGAATGTTGTAATCGCTG 167617
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || |||||||| |||||||| ||||||||||||||||| || | ||
Sbjct 167616 AGTGTACGGCCATCCTCCAATTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCTGGTGGA 167557
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||| || || || |||| ||||| | ||| |||||| || ||| ||
Sbjct 167556 ATACCCTCCTTATCCTGGATCTTTGACTTGACATTATCAATTGTGTCCGAAGACTCAACT 167497
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || ||||| || || || | ||| || ||||| ||||||||
Sbjct 167496 TCCAATGTAATAGTCTTGCCCGTCAAAGTCTTGACAAATATTTGCAT 167450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381367257437232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |