Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 >seq18 Length=186891 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || ||| || ||||| |||||||||||||| || | | | || || Sbjct 167658 ACCAAGTGCAGAGTGCTCTCCTTTTGAATGTTGTAATCGCTGAGTGTACGGCCATCCTCC 167599 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| ||||| ||| | ||||| || |||||||| |||||| || || || || Sbjct 167598 AATTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATACCCTCCTTATCCTGG 167539 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| ||| | || || || || | || || || || ||||| || || Sbjct 167538 ATCTTTGACTTGACATTATCAATTGTGTCCGAAGACTCAACTTCCAATGTAATAGTCTTG 167479 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||| || ||||| ||||||||| Sbjct 167478 CCCGTCAAAGTCTTGACAAATATTTGCATA 167449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176975314264