Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq476 98.7 1e-15 >seq476 Length=308794 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| || ||| ||| || || |||| | ||||||||| || ||||| ||||| Sbjct 12807 GCTCGAGGAGGTTCTCGTTAACAATTCCGTCAGAGGCAGCGAAGAAAGCGAGGACGTGGG 12866 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | ||| | ||||| | |||||| || || ||||||||||||| | |||||||| | Sbjct 12867 AGATAAAGTAACGTTCATCATCGTTGAGCTTGTTGTTCCAATCGTGGAGATCCTTGGATA 12926 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 || ||||||||| | ||||| || | | || ||||||||| |||||||| Sbjct 12927 GATCAATCTCTTCGGCAGTCCAGAATGAAGCTTCGGCCTTCTTGTACATTTGCCAGA 12983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659384426880