Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq104 242 1e-58
seq57 111 4e-19
seq476 95.1 3e-14
>seq104
Length=83277
Score = 242 bits (268), Expect = 1e-58
Identities = 1053/1638 (64%), Gaps = 48/1638 (3%)
Strand=Plus/Minus
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||||| || || |||||| | ||||| |||||| | || ||||| || |||| | ||
Sbjct 48509 TGAACGTCCACAACATATGATTATGCGCGTTGCTGTCGGAATCCACGGCGAGGATATCGA 48450
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCA 363564
|| || || || || || || ||| | || | | || ||||| |||||| | ||
Sbjct 48449 GGCTGCCATCGAGACCTACAA-CTTG-ATGTCCAGCAAATACTTCACCCACGCCTCCCCC 48392
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| | | | ||||| || | | |||| | || || ||||| ||| | | |||
Sbjct 48391 ACACTCTTCGCAGCTGGTACACCACAGGCACAACTTTCATCCTGCTTCCTTATCGACATG 48332
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| || ||||||| |||||| | || | |||||| | ||||| |||
Sbjct 48331 AAGGAGGACAGCATTGATGGTATCTACGACACATTGAAAATTTGTGCCATGATTTCAAAG 48272
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744
|| || || || || ||| | | |||| | ||||| | ||| |||
Sbjct 48271 AACGCTGGTGGTATCGGTCTCAATGTTCACAGAATCCGTGCGACGGGTGCTTATATTGCG 48212
Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|| ||| ||| |||| || || | |||||||||||||| || || |||| || ||
Sbjct 48211 GGTACAAACGGAAACTCCAACGGAATTGTTCCCATGCTTCGAGTTTTCAACAACACCGCT 48152
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
|| || || || || ||||| ||||| || || || || || || || |||||
Sbjct 48151 AGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCTTTCGCCATCTACCTTGAGCCA 48092
Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924
|| || ||| |||| ||||| ||||| ||||| || ||| ||||| ||||| |
Sbjct 48091 TGGCACGCAGATGTTTTCGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAGGTT 48032
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
||||| |||||||| ||||| || || ||| | | || | || |||||||| || ||
Sbjct 48031 CGTGCCCGTGATCTCTTCTACGCTCTCTGGATCCCAGATCTCTTCATGAAGCGTGTTGA- 47973
Query 363985 GCAGGTAAGA------ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038
|||| | ||| || | | ||||| |||| ||||| || | ||||
Sbjct 47972 -----AAAGAACCTTGACTGGACATTGATGTGCCCCAACGAGTGTCCTGGATTGGCCGAC 47918
Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098
|| | |||||||| | | ||| | || || || || || || || || |||| |||
Sbjct 47917 GTCTACGGTGACGAGTTCGAGGCTTTGTATGAGAAATACGAGTCTGAAGGCAAGGGTCGC 47858
Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
|||| || || || ||||| |||| | ||| | || | |||| |||||| |||
Sbjct 47857 AAGAGCATCAAAGCCCAAAAGCTTTGGTACTCTATCCTTGAGGCTCAGACTGAGACCGGA 47798
Query 364159 ACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
| ||||| | ||| | ||||| ||| | |||||||| ||| ||||| || | || ||
Sbjct 47797 A-ACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGTAACCAAAAGAATCTCGG 47739
Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276
||| | || | || |||| | || || |||||| | || ||| || || || |||
Sbjct 47738 TACCA-TCCGAAGCTCCAACTTGTGCACTGAGATTGTCGAGTACTGTGCACCAGATGAGG 47680
Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-----AAAAGA-TGGTA 364330
|| || || || | || ||| | || || || | | ||| | |||| || |
Sbjct 47679 TCGCTGTTTGCAATTTGGCATCGCTTGCTCTCCCAACATATGTTGACGAGAAGACTGCCA 47620
Query 364331 CTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG-CA--ATCTCG-AC 364386
||| |||| ||| | || | || || || || | || | | || | || | |
Sbjct 47619 CTTATGACTTCCAAAAGCTCCACGAGGT---CTGCCAAG-TAGTCGTCAAGAACTTGAAT 47564
Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCA 364445
||| ||||||| || ||||| ||| ||||||| || || | | ||| | |||||
Sbjct 47563 AAGATTATCGATGTCAACTATTACCCAGTTCCTGAGGCAAGAAAGAGC-AATTTCCGTCA 47505
Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505
| || |||| ||| ||||| || || || ||||| | || || || | |
Sbjct 47504 CAGACCTATTGCTCTCGGTGTTCAAGGTCTTGCTGATGCCTTCTTGGCTCTTCGCCTTCC 47445
Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565
|| || || || || || || || | | ||||| ||||| || || ||
Sbjct 47444 TTTCGAGTCTCCAGAAGCCAAGCACCTTAACATCCAAATCTTCGAAACCATTTACCACGC 47385
Query 364566 CGCAATGACTGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGG 364624
|| ||||||||| |||| || |||||||||| | || || || || | |
Sbjct 47384 TGCTTTGACTGCTTCCGTG-GAGTTGGCAAAAATTCATGGTCCATATGAGACATACCAAG 47326
Query 364625 GGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCC 364684
| || ||| || |||| | |||| | ||| | ||| ||| || || | | |
Sbjct 47325 GCTCACCTGCCTCCAAGGGCGAGCTCCAATATGACATGTGGGGTGTTACACCTACCGATC 47266
Query 364685 GATGGAACTGGGATACGCTACGTTCCAAC--GTTAAGAAGCATGGTACTCGCAAC---TC 364739
||| | |||| || ||| | |||| || | || || | |||||| |
Sbjct 47265 TTTGGGATTGGGCTA-GCT-TGAAGCAACAGATTGCTCAACACGGCATCCGCAACAGTTT 47208
Query 364740 CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTG 364799
||||| || || ||||| || || ||| ||||| || || |||||||||
Sbjct 47207 GCTCGT---CGCTCCTATGCCAACTGCCAGTACCAGTCAGATTCTTGGTTTCAACGAGTG 47151
Query 364800 CTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGT 364859
|||||| || | ||| ||| | ||||| || || || ||| | ||||| || | |||
Sbjct 47150 CTTCGAGCCATATACCTCCAACATATATTCTCGACGTGTCCTTGCTGGAGAGTTCCAGGT 47091
Query 364860 AGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAA 364919
|| || | || | ||||||||| || || || ||| || | ||||||
Sbjct 47090 TGTCAACCCATGGCTTCTTAAGGATCTTGTTGATATGGGACTCTGGTCCGATAACATGAA 47031
Query 364920 GAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCT 364979
|||| |||||| || | ||| || | || || ||||| |||||| ||| |
Sbjct 47030 GAACCGTATCATTGCTGACGGTGGATCAATCCAAAATGTTCCAAATATTCCAGCTGATAT 46971
Query 364980 GAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGC 365039
||| || ||||||| ||||| ||||| || || || || || | | ||||| ||
Sbjct 46970 CAAGGCTCTTTACAAGACCGTTTGGGAGATCTCACAACGTACCATCGTCCAGATGGCTGC 46911
Query 365040 CGATCGCGGTGCTTTTAT 365057
||| || ||||| || ||
Sbjct 46910 CGACCGTGGTGCATTCAT 46893
>seq57
Length=701840
Score = 111 bits (122), Expect = 4e-19
Identities = 279/419 (67%), Gaps = 45/419 (11%)
Strand=Plus/Minus
Query 111421 TAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA 111480
||||||| ||||| |||||||||||||| || | || ||| || || ||| | ||
Sbjct 623099 TAAAAATCTGGGACGGAAATGGATCACGCGAATACCTCGATAGCGTAGGCCTTTCCCACC 623040
Query 111481 ACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACT 111540
|| || ||| ||||| |||||||| || || || ||||||||||| ||||| || ||
Sbjct 623039 GCGCAGTAGGAGATCTTGGACCAGTCTATGGCTTCCAATGGCGCCATTTTGGGGCTGA-- 622982
Query 111541 ACAAAACCATGC----ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| | |||| ||| | ||| || || ||||| ||||| || || | ||
Sbjct 622981 ATATGTTGATGCCGCAACGGATTATACGA-GCA-AGGGAGTCGATCAGTTGCAAGAGGTT 622924
Query 111597 ATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCA 111656
|| ||| | | | ||| || || | ||| || |||||| ||||||| ||||| ||
Sbjct 622923 ATCGATAAGTTGAGGAATAATCCTTATGATCGACGGATTATTTTGAGTGCGTGGAATCCG 622864
Query 111657 AATGCATTGGAAAAAATGGCACTTCCACCATGTCATCT-TATGTGCCAGTTTTATGT--- 111712
| | ||| || ||||| || || || |||||| | | || | |||||||||||
Sbjct 622863 AGGGATTTGAAACTTATGGCGCTGCCGCCTTGTCATATGTTTGCG-CAGTTTTATGTTTC 622805
Query 111713 -------------ACAC--GACGGGAT--------------GCTTTCA-TGCCAAATGTA 111742
|||| || || || | || || || ||| | ||
Sbjct 622804 GTATCCACCAACCACACCAGATGGAATGAAGGGCAAGGGGAGATTGCATTGTCAACTTTA 622745
Query 111743 TCAG-CGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTA 111800
|||| || ||| |||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 622744 TCAGAGGAGCTG-TGATATGGGACTTGGTGTTCCGTTTAATATTGCAAGTTATGCGCTA 622687
>seq476
Length=308794
Score = 95.1 bits (104), Expect = 3e-14
Identities = 341/529 (64%), Gaps = 12/529 (2%)
Strand=Plus/Minus
Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAA---CAATGAACGTTCATTCGCG 22488
|| ||||| || || |||||||| | |||||| | ||| ||| | | || ||
Sbjct 12589 ATCAAGAAGAAAGCCGATTGGGCTGTCCGATGGATCCAAGACAAGGAATCTACCTTTGCT 12530
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||||| |||| ||||||| ||||| || || ||||| ||| | || |
Sbjct 12529 CAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCTCTTTCGCCTCC 12470
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
||||| ||| | || || |||| | ||| | ||||| || || || || ||||| ||
Sbjct 12469 ATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATC 12410
Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATT 22668
||| ||||||||||| || ||||| || || || | || | || ||| | |
Sbjct 12409 TCCCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT-TC--TCTCACTTGAAG 12353
Query 22669 CATAAACTTCCA---TATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAA 22725
||| | ||| | | | | || | | | || || | || ||||| ||||
Sbjct 12352 CAT---CGCCCAAGCAAGGCAGCAGTCCAGGCCGTCATCACCGAGGCTGTTGAGATTGAG 12296
Query 22726 CGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATG 22785
| || | |||||| | || ||| | || || || ||| | | |||
Sbjct 12295 CAAGAGTTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTGGGCATGAACGCCAACTTGATG 12236
Query 22786 AGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCAT 22845
| ||| ||| | || || || |||||||| | |||| ||||| ||| ||| |
Sbjct 12235 AAGCAATACATTGAGTTCGTCGCCGATCGTCTCCTCCTTTCTCTCGGCAATGAGAAGGTT 12176
Query 22846 TATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAAT 22905
|| || || | || ||||| || | ||||| || || |||| ||||||||| ||
Sbjct 12175 TACAAGGTTGCCAACCCATTCGACTTTATGGAGAACATCTCTCTTGCAGGAAAGACTAAC 12116
Query 22906 TTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATG 22954
|||||||| || | |||| ||| |||||||| || ||||| |||| ||
Sbjct 12115 TTCTTCGAGAAGCGTGTTGCTGATTACCAAAAGGCTGGTGTCATGGCTG 12067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303345183594128
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