Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq476 95.1 1e-14
>seq476
Length=308794
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/226 (69%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || |||||||| || | ||| || || || || |||||||| ||| ||| || |
Sbjct 12374 GCATGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAG 12433
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| | | || || || ||||| | ||| || || || || ||| ||| || ||
Sbjct 12434 ACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAA 12493
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || ||||| || |||| ||||| ||||| | | ||| || |
Sbjct 12494 GATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAG----ATTCCTTGT 12549
Query 93271 ----GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312
||||||| | ||||||||||||||| ||||| || |||||
Sbjct 12550 CTTGGATCCATCGGACAGCCCAATCGGCTTTCTTCTTGATGCAAGG 12595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556857291776960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |