Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq444 91.5 3e-13 >seq444 Length=884337 Score = 91.5 bits (100), Expect = 3e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| ||| | ||||| ||||||| || || ||||||||||| || || Sbjct 363626 GGTCTCGACGCTGAGTTGGTTTCTCACTCCCGTATGTTGGGTCTTTCTGGTGGTCAACGT 363685 Query 280740 GTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGA 280798 ||||| | ||| ||| || ||||| ||||||| |||||| |||||||||| ||||| Sbjct 363686 GTCAAGGTCGTCCTCGCTGCTTGCTCT-TGGCAACGACCTCACTTGATCGTTCTTGACGA 363744 Query 280799 GCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837 |||||||||||| |||| || || ||| || ||||| Sbjct 363745 GCCTACCAACTACTTGGATCGTGACTCCCTTGGAGCTCT 363783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830162743864