Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq444 91.5 3e-13
>seq444
Length=884337
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739
||||| ||| | ||||| ||||||| || || ||||||||||| || ||
Sbjct 363626 GGTCTCGACGCTGAGTTGGTTTCTCACTCCCGTATGTTGGGTCTTTCTGGTGGTCAACGT 363685
Query 280740 GTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGA 280798
||||| | ||| ||| || ||||| ||||||| |||||| |||||||||| |||||
Sbjct 363686 GTCAAGGTCGTCCTCGCTGCTTGCTCT-TGGCAACGACCTCACTTGATCGTTCTTGACGA 363744
Query 280799 GCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCT 280837
|||||||||||| |||| || || ||| || |||||
Sbjct 363745 GCCTACCAACTACTTGGATCGTGACTCCCTTGGAGCTCT 363783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027830162743864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |