Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq104 192 7e-44
seq476 109 7e-19
>seq104
Length=83277
Score = 192 bits (212), Expect = 7e-44
Identities = 1124/1785 (63%), Gaps = 47/1785 (3%)
Strand=Plus/Plus
Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617
|||| | ||||||| || ||| || ||| | | ||||| |||||||| || |||
Sbjct 46740 TCAACGGTGAACTGGATAGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTC 46799
Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677
||||| ||| |||||||| | | |||||| || | ||| | |||||
Sbjct 46800 TTGAGACCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCC 46859
Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737
| |||| || |||||| ||| |||||||| ||||| ||||| || || |||||
Sbjct 46860 TTCATGTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATC 46919
Query 113738 TCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCAT 113795
| | | | | | | ||| | ||||| || || |||| || ||| ||||||
Sbjct 46920 TGGACGA--TGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAG 46977
Query 113796 CTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATAT 113855
|||| |||| | ||||||||| || ||||| | | || | | |||||| |
Sbjct 46978 CTGGAATATTTGGAACATTTTGGATTGATCCACCGTCAGCAATGATACGGTTCTTCATGT 47037
Query 113856 CCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAAC 113913
| |||||||| || || | ||||||| | || ||| | |||||||
Sbjct 47038 TATCGGACCAGAGTCCCATATCAACAAGATCCTTAAGAAGCCATGGGT--TGACAACCTG 47095
Query 113914 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTC 113973
||||| || || ||| |||| ||| || |||| || |||||||| ||||||||
Sbjct 47096 GAACTCTCCAGCAAGGACACGTCGAGAATATATGTTGGAGGTATATGGCTCGAAGCACTC 47155
Query 113974 ATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033
||| ||| | || || ||| ||| || ||||| || || | ||| | |||||
Sbjct 47156 GTTGAAACCAAGAATCTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTT 47215
Query 114034 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 114091
|||| || | || ||| ||| ||| | | |||| || | || | |
Sbjct 47216 GCGGATGCCGTGTTGAGCAATCTGTTGCTTCAAGCTAGCCCAATCCCAAA-GATCGGTAG 47274
Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151
|| | | | |||||| ||| | ||||| || | |||||| || || || | ||
Sbjct 47275 GTGTAACACC-CCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAT 47333
Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211
||||| ||||| || | || | ||||| || | || | || ||||| ||
Sbjct 47334 GTCTCATATGGACCATGAATTTTTGCCAACTCCACGGAAGCAGTCAAAGCAGCGTGGTAA 47393
Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG- 114270
|| || || || || | || | |||||| || || || || | || ||
Sbjct 47394 ATGGTTTCGAAGATTTGGATGTTAAGGTGCTTGGCTTCTGGAGACTCGAAAGGAAGGCGA 47453
Query 114271 -GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 114329
| | || || |||| || |||||||| |||||||| |||| || | || | |
Sbjct 47454 AGAGCCAAG--AAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGA 47511
Query 114330 TATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTA 114386
||| ||||| || ||| || || ||| | || |||||||| | |||| |
Sbjct 47512 AATTGCTCTTTCTTGC---CTCAGGAACTGGGTAATAGTTGACATCGATAATCTTATTCA 47568
Query 114387 GATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT 114446
|| ||| ||| || | || || || ||||||| | | ||| || || |||||
Sbjct 47569 AGTTCTTGACGACTACTTGGCAGACCTCGTGGAGCTTTTGGAAGTCATAAGTGGCAGTCT 47628
Query 114447 CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506
|| | ||||| | || || || | || |||| ||| || |||| | ||||||
Sbjct 47629 TCTCGTCAACATATGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTG 47688
Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566
|| |||||| | ||| || || ||||| || || || ||||| || | ||||
Sbjct 47689 GTGCACAGTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCT 47748
Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626
|||| || |||| ||| || |||||||||||||||||| | || | || ||||| |
Sbjct 47749 TTTGGTTACTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAG 47808
Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686
| || | || || |||| | ||| | | |||| | || ||| || |
Sbjct 47809 TCTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGA---TGCTCTTG---CGAC 47862
Query 114687 CCT--CCT----CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740
||| ||| |||||| || || | || || ||||| ||||| | | || |
Sbjct 47863 CCTTGCCTTCAGACTCGTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGG 47922
Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800
| || || || | ||||| | | | ||| | | || ||||||||||
Sbjct 47923 CCAATCCAGGACACTCGTTGGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCT 47982
Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860
|||||||||| ||||||||||||||||| |||||||||| || ||| | || || |
Sbjct 47983 TCATGAAGAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCT 48042
Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920
|| || || || | || | || || | | ||| |||||||| || || ||||
Sbjct 48043 TTCCGTGGTTCTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCATGGCTCAAGGT 48102
Query 114921 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGG 114974
| | |||| | || | |||| |||| | || | ||||| || || |||
Sbjct 48103 AGATGGCGAAAGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTAGCGGTGT 48159
Query 114975 CATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATAC 115034
|| || || |||||||| |||| || || | || | || ||||| ||| ||||
Sbjct 48160 TGTTGAAAACTCGAAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCCGCAATAT 48219
Query 115035 GAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 115094
|| | || | || || | | | ||| ||||| || || |||||| |
Sbjct 48220 AAGCACCCGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCGTTCTTTGAAA 48279
Query 115095 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGA 115154
| || || | | || ||||||| || || || ||| |||| | |||
Sbjct 48280 TCATGGCACAAATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGA 48339
Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 115214
||||||||||| || | ||||| | |||||||||||| |||||| || || | |
Sbjct 48340 TAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTACCAGCTGCGAAGAGTGTGGGGGAGG 48399
Query 115215 CGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272
||||| |||| || ||| ||||||| | ||||||||| | | | || || ||
Sbjct 48400 CGTGGGTGAA-GTA-TTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATC 48457
Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
|| ||||| || |||| | || ||||||| ||| | ||| ||
Sbjct 48458 CTCGCCGTGGATTCCGACAGCAACGCGCATAATCATATGTTGTGG 48502
>seq476
Length=308794
Score = 109 bits (120), Expect = 7e-19
Identities = 306/461 (66%), Gaps = 24/461 (5%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816
||| || |||| ||||||||||||||||| ||||| || | |||| ||| |||||||
Sbjct 12089 GTAATCAGCAACACGCTTCTCGAAGAAGTTAGTCTTTCC-TGCAAGAGAGATGTTCTCCA 12147
Query 125817 TAAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAG 125871
|||| || |||||||| | ||| || | ||| | || |||
Sbjct 12148 TAAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAGAGAAAG-----GAG 12202
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
||||||||| | |||| |||||||||| | |||| | | |||||| || | ||
Sbjct 12203 GAGACGATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGAAG 12262
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
||| || || || || | |||| | | |||||| || || || || | ||
Sbjct 12263 AGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGAC 12322
Query 125992 GGCGTGAA-TGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCA 126049
||| || | || || || | || | || || |||| |||||| | ||||
Sbjct 12323 GGCCTGGACTGCTG-CCTTGCTTGGGCGAT-GCTTCAAGTGAGAGAAGAG----AAGGCA 12376
Query 126050 ----AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|| || |||||||||||| ||||||||||| | || || |||||| || ||
Sbjct 12377 TGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACC 12436
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
| |||||| || ||||||||||||||||| || | || || || |||||||||
Sbjct 12437 AGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGAT 12496
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
||||| ||| || || |||| ||||| | ||||||||
Sbjct 12497 ACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGG 12537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349836672320
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