Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq104 192 7e-44 seq476 109 7e-19 >seq104 Length=83277 Score = 192 bits (212), Expect = 7e-44 Identities = 1124/1785 (63%), Gaps = 47/1785 (3%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | ||||||| || ||| || ||| | | ||||| |||||||| || ||| Sbjct 46740 TCAACGGTGAACTGGATAGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTC 46799 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| ||| |||||||| | | |||||| || | ||| | ||||| Sbjct 46800 TTGAGACCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCC 46859 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | |||| || |||||| ||| |||||||| ||||| ||||| || || ||||| Sbjct 46860 TTCATGTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATC 46919 Query 113738 TCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCAT 113795 | | | | | | | ||| | ||||| || || |||| || ||| |||||| Sbjct 46920 TGGACGA--TGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAG 46977 Query 113796 CTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATAT 113855 |||| |||| | ||||||||| || ||||| | | || | | |||||| | Sbjct 46978 CTGGAATATTTGGAACATTTTGGATTGATCCACCGTCAGCAATGATACGGTTCTTCATGT 47037 Query 113856 CCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAAC 113913 | |||||||| || || | ||||||| | || ||| | ||||||| Sbjct 47038 TATCGGACCAGAGTCCCATATCAACAAGATCCTTAAGAAGCCATGGGT--TGACAACCTG 47095 Query 113914 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTC 113973 ||||| || || ||| |||| ||| || |||| || |||||||| |||||||| Sbjct 47096 GAACTCTCCAGCAAGGACACGTCGAGAATATATGTTGGAGGTATATGGCTCGAAGCACTC 47155 Query 113974 ATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||| ||| | || || ||| ||| || ||||| || || | ||| | ||||| Sbjct 47156 GTTGAAACCAAGAATCTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTT 47215 Query 114034 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 114091 |||| || | || ||| ||| ||| | | |||| || | || | | Sbjct 47216 GCGGATGCCGTGTTGAGCAATCTGTTGCTTCAAGCTAGCCCAATCCCAAA-GATCGGTAG 47274 Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | | | |||||| ||| | ||||| || | |||||| || || || | || Sbjct 47275 GTGTAACACC-CCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAT 47333 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211 ||||| ||||| || | || | ||||| || | || | || ||||| || Sbjct 47334 GTCTCATATGGACCATGAATTTTTGCCAACTCCACGGAAGCAGTCAAAGCAGCGTGGTAA 47393 Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG- 114270 || || || || || | || | |||||| || || || || | || || Sbjct 47394 ATGGTTTCGAAGATTTGGATGTTAAGGTGCTTGGCTTCTGGAGACTCGAAAGGAAGGCGA 47453 Query 114271 -GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 114329 | | || || |||| || |||||||| |||||||| |||| || | || | | Sbjct 47454 AGAGCCAAG--AAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGA 47511 Query 114330 TATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTA 114386 ||| ||||| || ||| || || ||| | || |||||||| | |||| | Sbjct 47512 AATTGCTCTTTCTTGC---CTCAGGAACTGGGTAATAGTTGACATCGATAATCTTATTCA 47568 Query 114387 GATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT 114446 || ||| ||| || | || || || ||||||| | | ||| || || ||||| Sbjct 47569 AGTTCTTGACGACTACTTGGCAGACCTCGTGGAGCTTTTGGAAGTCATAAGTGGCAGTCT 47628 Query 114447 CTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCT 114506 || | ||||| | || || || | || |||| ||| || |||| | |||||| Sbjct 47629 TCTCGTCAACATATGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTG 47688 Query 114507 TATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCT 114566 || |||||| | ||| || || ||||| || || || ||||| || | |||| Sbjct 47689 GTGCACAGTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCT 47748 Query 114567 TTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCG 114626 |||| || |||| ||| || |||||||||||||||||| | || | || ||||| | Sbjct 47749 TTTGGTTACTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAG 47808 Query 114627 TTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 | || | || || |||| | ||| | | |||| | || ||| || | Sbjct 47809 TCTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGA---TGCTCTTG---CGAC 47862 Query 114687 CCT--CCT----CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 ||| ||| |||||| || || | || || ||||| ||||| | | || | Sbjct 47863 CCTTGCCTTCAGACTCGTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGG 47922 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 | || || || | ||||| | | | ||| | | || |||||||||| Sbjct 47923 CCAATCCAGGACACTCGTTGGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCT 47982 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 |||||||||| ||||||||||||||||| |||||||||| || ||| | || || | Sbjct 47983 TCATGAAGAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCT 48042 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || || | || | || || | | ||| |||||||| || || |||| Sbjct 48043 TTCCGTGGTTCTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCATGGCTCAAGGT 48102 Query 114921 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGG 114974 | | |||| | || | |||| |||| | || | ||||| || || ||| Sbjct 48103 AGATGGCGAAAGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTAGCGGTGT 48159 Query 114975 CATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATAC 115034 || || || |||||||| |||| || || | || | || ||||| ||| |||| Sbjct 48160 TGTTGAAAACTCGAAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCCGCAATAT 48219 Query 115035 GAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 115094 || | || | || || | | | ||| ||||| || || |||||| | Sbjct 48220 AAGCACCCGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCGTTCTTTGAAA 48279 Query 115095 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGA 115154 | || || | | || ||||||| || || || ||| |||| | ||| Sbjct 48280 TCATGGCACAAATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGA 48339 Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 115214 ||||||||||| || | ||||| | |||||||||||| |||||| || || | | Sbjct 48340 TAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTACCAGCTGCGAAGAGTGTGGGGGAGG 48399 Query 115215 CGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272 ||||| |||| || ||| ||||||| | ||||||||| | | | || || || Sbjct 48400 CGTGGGTGAA-GTA-TTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATC 48457 Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 || ||||| || |||| | || ||||||| ||| | ||| || Sbjct 48458 CTCGCCGTGGATTCCGACAGCAACGCGCATAATCATATGTTGTGG 48502 >seq476 Length=308794 Score = 109 bits (120), Expect = 7e-19 Identities = 306/461 (66%), Gaps = 24/461 (5%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 ||| || |||| ||||||||||||||||| ||||| || | |||| ||| ||||||| Sbjct 12089 GTAATCAGCAACACGCTTCTCGAAGAAGTTAGTCTTTCC-TGCAAGAGAGATGTTCTCCA 12147 Query 125817 TAAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAG 125871 |||| || |||||||| | ||| || | ||| | || ||| Sbjct 12148 TAAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAGAGAAAG-----GAG 12202 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||||||| | |||| |||||||||| | |||| | | |||||| || | || Sbjct 12203 GAGACGATCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGAAG 12262 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 ||| || || || || | |||| | | |||||| || || || || | || Sbjct 12263 AGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGAC 12322 Query 125992 GGCGTGAA-TGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCA 126049 ||| || | || || || | || | || || |||| |||||| | |||| Sbjct 12323 GGCCTGGACTGCTG-CCTTGCTTGGGCGAT-GCTTCAAGTGAGAGAAGAG----AAGGCA 12376 Query 126050 ----AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 || || |||||||||||| ||||||||||| | || || |||||| || || Sbjct 12377 TGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACC 12436 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 | |||||| || ||||||||||||||||| || | || || || ||||||||| Sbjct 12437 AGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGAT 12496 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| ||| || || |||| ||||| | |||||||| Sbjct 12497 ACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGG 12537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349836672320