Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq18 82.4 8e-11
>seq18
Length=186891
Score = 82.4 bits (90), Expect = 8e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| || || | | ||||| || ||||||||||||||
Sbjct 167220 CCACCACGGAGACGGAGAACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAGTCCGAA 167161
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| ||||| | | |||| ||||| ||||||||||| ||
Sbjct 167160 AGGGTGCGGCCGTCCTCAAGTTGCTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGG 167101
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | ||| ||| |||| || |||
Sbjct 167100 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTCGATTCGACC 167041
Query 138568 TCGACCGTCAGCGTTTTACCAGTCA 138592
|||| || | || || || ||||
Sbjct 167040 TCGAGGGTGATAGTCTTGCCGGTCA 167016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259273546880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |