Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq18 84.2 2e-11
>seq18
Length=186891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || || || |||||||||||||| || ||| | |||| ||| ||||||||
Sbjct 167425 ATGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGACAAGGTTCGGCCATCCTCCAATTG 167366
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| |||||| | || | ||| || ||||| || || || || || ||||| ||||| ||
Sbjct 167365 CTTGCCTGCGAAAATGAGTCGCTGTTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTT 167306
Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
|| | || | || | || || ||||| || || || | || | || || || |
Sbjct 167305 CGACTTTA-CGTTGTCGATAGTATCTGAAGATTCAACCTCCAAGGTGATGGTCTTTCCAG 167247
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || || || ||||||||
Sbjct 167246 TAAGAGTCTTGACGAAGATTTGCAT 167222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000352379840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |