Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq104 298 6e-76
seq476 120 4e-22
seq222 114 2e-20
seq311 91.5 2e-13
>seq104
Length=83277
Score = 298 bits (330), Expect = 6e-76
Identities = 1174/1820 (65%), Gaps = 45/1820 (2%)
Strand=Plus/Plus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTAC-ATATG 105639
||| ||| |||||||||||||| || |||||||| || | ||||| || | | | |||
Sbjct 46770 GCCATAGTACGGAGATAGTACATTCCAGTCTTGAGACCCAGCTTCCA-GCCTGCGAAATG 46828
Query 105640 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTG 105699
|||| | || ||| ||| ||||| | |||| | ||||| |||| ||
Sbjct 46829 CATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTG 46888
Query 105700 GTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCC 105757
|||||||| |||||| | || ||||| | | || | | | | ||| | |||
Sbjct 46889 ATCAATGAATGCACCACGGTCGGCAGCCATCTGGACGA--TGGTACGTTGTGAGATCTCC 46946
Query 105758 CACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAA 105817
|| || || ||| ||| |||||||||| |||| |||| || | |||||| |||||
Sbjct 46947 CAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGAATATTTGGAACATTTTGGATTGAT 47006
Query 105818 CCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGA 105877
|| || | | || | | |||||| | | |||||| || || || | |||
Sbjct 47007 CCACCGTCAGCAATGATACGGTTCTTCATGTTATCGGACCAGAGTCCCATATCAACAAGA 47066
Query 105878 TCATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGAT 105935
|| || | || ||| |||||||| | |||||||| || ||| | || ||
Sbjct 47067 TCCTTAAGAAGCCATGG--GTTGACAACCTGGAACTCTCCAGCAAGGACACGTCGAGAAT 47124
Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGG 105995
| ||||| | || || || || ||||| || || ||| | || || ||| ||
Sbjct 47125 ATATGTTGGAGGTATATGGCTCGAAGCACTCGTTGAAACCAAGAATCTGACTGGTACTGG 47184
Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCT 106055
| |||||||| || || | | | |||||| || | || | || || ||| ||
Sbjct 47185 CAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGATGCCGTGTTGAGCAATCTGTTGCT 47244
Query 106056 TGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAG 106113
| | | |||| || | || | | ||| | || ||||||| ||| |||| ||
Sbjct 47245 TCAAGCTAGCCCAATCCCAAA-GATCGGTAGGTGTAACAC-CCCACATGTCATATTGGAG 47302
Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173
| | || | ||| | || || || | |||||||||| | ||| || || |||||
Sbjct 47303 CTCGCCCTTGGAGGCAGGTGAGCCTTGGTATGTCTCATATGGACCATGAATTTTTGCCAA 47362
Query 106174 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 106233
|| | || || | ||||| || |||||||| ||||| | || | |
Sbjct 47363 CTCCACGGAAGCAGTCAAAGCAGCGTGGTAAATGGTTTCGAAGATTTGGATGTTAAGGTG 47422
Query 106234 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA-AATACATCCGCGAGACCTT 106292
||||||||| || || || | | || | | | | || |||| || |||||||
Sbjct 47423 CTTGGCTTCTGGAGACTCGAAAG-GAAGGCGAAGAGCCAAGAAGGCATCAGCAAGACCTT 47481
Query 106293 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGG 106349
||||||| | | ||||||||||||| || | ||| ||||| || |||| || |
Sbjct 47482 GAACACCGAGAGCAATAGGTCTGTGACGGAAATTGCTCTTTCTTGC---CTCAGGAACTG 47538
Query 106350 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATTTCA 106408
| ||| | || || || | || | || ||| || | ||| | || ||
Sbjct 47539 GGTAATAGTTGACATCGATAATCTTATTCAAGTTCTTGACGACTA-CTTGGCAGACCTCG 47597
Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468
|| || |||| | ||| ||||| ||||| || | ||||| |||| || || |
Sbjct 47598 TGGAGCTTTTGGAAGTCATAAGTGGCAGTCTTCTCGTCAACATATGTTGGGAGAGCAAGC 47657
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
|||||||||||||||||||| |||||| | |||||| | ||| || || |||
Sbjct 47658 GATGCCAAATTGCAAACAGCGACCTCATCTGGTGCACAGTACTCGACAATCTCAGTGCAC 47717
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
|||||||| || || || || | ||||||||||||||||||| |||||| ||||||
Sbjct 47718 AAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGGTTACTCTTTCGGTTGCAAGCATCC 47777
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648
||||| |||||| | || | || ||||| ||||| | || || || | | ||| |
Sbjct 47778 TTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGAGTACCAAAGC 47837
Query 106649 TCGGCGGC--TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGG 106705
| ||| || | | | || | ||| | || || | |||||| || || |
Sbjct 47838 TTTTGGGCTTTGATGCTCTTGC---GACCCTTGCCTTCAGACTCGTATTTCTCATACAAA 47894
Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765
|| || ||||| ||||| |||||| | || || || || || || | |
Sbjct 47895 GCCTCGAACTCGTCACCGTAGACGTCGGCCAATCCAGGACACTCGTTGGGGCACATCAAT 47954
Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 106825
| ||| | | || ||||| ||||||||||| || ||||| ||||| || | |
Sbjct 47955 GTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCGTAG 48014
Query 106826 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885
|||||||| | ||| |||| || | || ||||| ||| | |||||||||||
Sbjct 48015 AAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCG 48074
Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 106939
| | ||| ||||||||||||||||| |||| |||| || || |||||
Sbjct 48075 AAAACATCTGCGTGCCATGGCTCAAGGTAGATGGCGAAAGCACC---AGGACGCTTGTTA 48131
Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999
||| |||||| ||||| | || ||| ||| || || |||||||| |||| ||| ||
Sbjct 48132 CCACCTTGATCAACATATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGAACAATTCCG 48191
Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059
| || | || ||||| ||| |||| || | || | | || | |
Sbjct 48192 TTGGAGTTTCCGTTTGTACCCGCAATATAAGCACCCGTCGCACGGATTCTGTGAACATTG 48251
Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119
| || ||||| ||||| |||||| || ||||| | | || | ||||||
Sbjct 48252 AGACCGATACCACCAGCGTTCTTTGAAATCATGGCACAAATTTTCAATGTGTCGTAGATA 48311
Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179
|| | || ||||||||| || ||||||||||||| || | || | ||||
Sbjct 48312 CCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGCAGGATGAAAGTTGTGCCTGTGGT 48371
Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGT 107237
|||||||| |||||| || || | ||||| |||| || ||| ||||||| ||
Sbjct 48372 GTACCAGCTGCGAAGAGTGTGGGGGAGGCGTGGGTGAA-GTA-TTTGCTGGACATCAAGT 48429
Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297
||| ||||| | | ||| || || || || |||||||| |||| || || |||||||
Sbjct 48430 TGTAGGTCTCGATGGCAGCCTCGATATCCTCGCCGTGGATTCCGACAGCAACGCGCATAA 48489
Query 107298 ACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCA 107356
||| | ||| || ||| || |||||||||| || | ||||| | || |||
Sbjct 48490 TCATATGTTGTGGACGTTCACAGATCTTGCCATCGAGGCGGAGGAGATATGATC-GCTCG 48548
Query 107357 AGGGTTTTGAGACCAAAGTA 107376
||||| |||| ||| |||||
Sbjct 48549 AGGGTCTTGAAACCGAAGTA 48568
>seq476
Length=308794
Score = 120 bits (132), Expect = 4e-22
Identities = 296/446 (66%), Gaps = 10/446 (2%)
Strand=Plus/Plus
Query 116993 CAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAA 117052
|||| |||||||| |||||||| ||||| || |||| ||||| ||||||||||| |
Sbjct 12097 CAACACGCTTCTCGAAGAAGTTAGTCTTTCCTGCAAGAGAGATGTTCTCCATAAAGTCGA 12156
Query 117053 ATGGATTCTTCGCGTTCCAAATGGGTGGCACC-CCAACTTGTTTGAGGAGACGATCCGAC 117111
|||| || | || ||| | || || | |||||||||||| |
Sbjct 12157 ATGGGTTGGCAACCTTGTAAACCT-TCTCATTGCCGAGAGAAAGGAGGAGACGATCGGCG 12215
Query 117112 ACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGGAGT 117171
|| |||||||||| | |||| | | |||||| || | ||| ||| || ||
Sbjct 12216 ACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGAAGAGCACAAGGAAGA 12275
Query 117172 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTT 117231
|| || | |||| ||| |||||||||||| ||||| | | || ||| |||| | |
Sbjct 12276 GCCTCGGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGACGGCCTGGACTGCT 12335
Query 117232 TCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA----AACTCCTGGTG 117287
| | | || | || ||| |||||| | |||| || || |||
Sbjct 12336 GCCTTGCTTGGGCGATGCTTCAAGTGAGAGAAGAG----AAGGCATGCGAAGTCGGTGTG 12391
Query 117288 GAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCG 117347
|||||||||||| ||||| || | || || |||||| || || | |||||| || ||
Sbjct 12392 GAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGGCCACG 12451
Query 117348 CTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGC 117407
|||||||||||| | || | | ||| || || ||||||||||||||| ||| ||
Sbjct 12452 CTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGATACCCTCAACAGCAGC 12511
Query 117408 AAACGCAAAAAGGCGCTCGGCGAAGG 117433
||| |||| ||| || | || ||||
Sbjct 12512 AAAGGCAACAAGACGTTGAGCAAAGG 12537
>seq222
Length=1012068
Score = 114 bits (126), Expect = 2e-20
Identities = 228/334 (68%), Gaps = 18/334 (5%)
Strand=Plus/Plus
Query 9274 CATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCAT 9333
|| ||| |||||||||||||| ||||||| || || | ||| || || |||||||
Sbjct 850485 CAGTATTGAAACCATCCATCTCGGTCAAAATCTGATTGAGAGTAGCCTCTCGCTCATCAT 850544
Query 9334 T--CGCTGGCATACCA-CCAGCACTGCGTTG---CTTTCCCACGGCATCAATCTCATCAA 9387
| | | || | | ||||| | | | |||||| | |||||||| |||||||
Sbjct 850545 TTCCACCACCAAATGAACCAGCTTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAA 850604
Query 9388 TGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGG 9447
|||||| |||||| || ||| | | ||| ||| |||||||||| ||||| || |
Sbjct 850605 TGAAGATAATACAAGGGGTATTCTTTCTGGCCATTGCAAAGAGATCTCGAACTCTGGAAG 850664
Query 9448 CGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA-CATT-----GGATGAAGG 9501
| || |||||||||||||||||||| || | ||||| || | || ||| |
Sbjct 850665 CACCAACACCAACAAACATCTCCACGAACT------CGGAACCACTAACGCTGAAGAAAG 850718
Query 9502 GGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTAC 9561
| ||| || || || || |||| || || | |||||||| ||||| || ||
Sbjct 850719 GCACACCCGACTCTCCGGCTGTGGCCTTTGCTAGTAAGGTCTTACCAGTACCGGGTGGAC 850778
Query 9562 CCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
| | |||| ||| || || |||||||| || ||
Sbjct 850779 CAGAAAGGATGGCTCCTCGGGGAATCTTAGCTCC 850812
>seq311
Length=439650
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 155097 TGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCA 155156
||| || || || |||||| ||||||| || ||||||||||| | |||||||||||
Sbjct 348898 TGGCGCAGGCGTAATTGATGCCGACTACCGTGGCCAAGTCAAAGTCCTCCTCTTCAATCA 348957
Query 155157 CGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAG 155214
||| || ||||| |||||||| ||| | || ||||| | |||||| | ||| | |||
Sbjct 348958 CGGCGAGAAAGATTTTGAGGTCAAGGAGGGAGATCGTGTAGCACAATTGGTCTTGGAG 349015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977083120960
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