Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq504 127 2e-24
>seq504
Length=220221
Score = 127 bits (140), Expect = 2e-24
Identities = 185/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930
|| |||||||||||||||||||| |||||| ||||| || | | | | ||| | ||
Sbjct 95899 ATCATGATTACATACCCATCTACCTTTGGTGTCTTTGAGCCTGAAGTCAAGGCAGTT-TG 95957
Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990
|| | ||||| || |||| || || || || | ||||| || ||| | || || ||
Sbjct 95958 CGAGTTGGTTCACGAGCATGGAGGACAAGTTTACATGGATGGTGCGAATATGAACGCTCA 96017
Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050
| ||| | ||| ||||| ||| || ||||| |||||||| ||| | || ||
Sbjct 96018 AATTGGATTGTGCTCACCTGGTGAGATTGGGGCTGATGTCTGTCATCTCAACCTTCACAA 96077
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAA- 155109
||||| |||||||| ||||| ||||||||||| || || ||||| || ||||| |||
Sbjct 96078 GACATTTTGTATTCCTCATGGGGGTGGAGGTCCAGGAGTTGGTCCAATTGGTGT--CAAG 96135
Query 155110 -AACATCTCACACCATT 155125
|||||| |||||||
Sbjct 96136 TCACATCTTGCACCATT 96152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579209150959360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |