Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq504 127 2e-24 >seq504 Length=220221 Score = 127 bits (140), Expect = 2e-24 Identities = 185/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930 || |||||||||||||||||||| |||||| ||||| || | | | | ||| | || Sbjct 95899 ATCATGATTACATACCCATCTACCTTTGGTGTCTTTGAGCCTGAAGTCAAGGCAGTT-TG 95957 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 || | ||||| || |||| || || || || | ||||| || ||| | || || || Sbjct 95958 CGAGTTGGTTCACGAGCATGGAGGACAAGTTTACATGGATGGTGCGAATATGAACGCTCA 96017 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | ||| | ||| ||||| ||| || ||||| |||||||| ||| | || || Sbjct 96018 AATTGGATTGTGCTCACCTGGTGAGATTGGGGCTGATGTCTGTCATCTCAACCTTCACAA 96077 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAA- 155109 ||||| |||||||| ||||| ||||||||||| || || ||||| || ||||| ||| Sbjct 96078 GACATTTTGTATTCCTCATGGGGGTGGAGGTCCAGGAGTTGGTCCAATTGGTGT--CAAG 96135 Query 155110 -AACATCTCACACCATT 155125 |||||| ||||||| Sbjct 96136 TCACATCTTGCACCATT 96152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579209150959360