Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq504 131 2e-25
>seq504
Length=220221
Score = 131 bits (144), Expect = 2e-25
Identities = 186/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605
|| ||||||||||| |||||||| |||||| ||||| | | ||| | ||| | ||
Sbjct 95899 ATCATGATTACATACCCATCTACCTTTGGTGTCTTTGAGCCTGAAGTCAAGGCAGTT-TG 95957
Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665
|| | ||||| ||| |||| || || || || | |||||||| ||| | || || ||
Sbjct 95958 CGAGTTGGTTCACGAGCATGGAGGACAAGTTTACATGGATGGTGCGAATATGAACGCTCA 96017
Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725
| || | ||| |||| ||| || ||||| |||||||| ||| | || ||
Sbjct 96018 AATTGGATTGTGCTCACCTGGTGAGATTGGGGCTGATGTCTGTCATCTCAACCTTCACAA 96077
Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAA- 159784
|||||| |||||||| ||||| ||||||||||| || || ||||| |||||||| |||
Sbjct 96078 GACATTTTGTATTCCTCATGGGGGTGGAGGTCCAGGAGTTGGTCCAATTGGTGT--CAAG 96135
Query 159785 -AACATCTCACACCATT 159800
|||||| |||||||
Sbjct 96136 TCACATCTTGCACCATT 96152
Score = 123 bits (136), Expect = 3e-23
Identities = 186/263 (71%), Gaps = 6/263 (2%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
||| | || ||| ||||| | ||||| || |||||||||||||| ||||| || |
Sbjct 94720 CAACGATTCGGTGTTCCTTTTGGATATGGTGGTCCTCATGCTGCTTTCTTCGCCGTTAGC 94779
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGA---ATTGTAGGTCAGTCAGTAGATAGCGAA 158559
||||| |||||| | || || || || | |||| || | || ||||||
Sbjct 94780 GACAAATATAAGCGGAAAATCCCAGGACGCCTCATTGGAGTT---TCGAAAGATAGACTT 94836
Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619
|| | || || ||||| ||||| ||||| ||||||| |||||| ||||||| ||
Sbjct 94837 GGAGACAAGGCGATGAGATTGGCACTTCAGACCCGAGAGCAACATATCCGAAGAGAAAAG 94896
Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679
||||| || || | ||||||||||| ||||| || || |||||| || ||||||||
Sbjct 94897 GCAACTAGCAATGTATGCACAGCACAGGCACTACTTGCAAATATGAGTGCTTTCTATGCT 94956
Query 158680 GCATATCATGGTGCAGATGGACT 158702
| ||||| || |||| || ||
Sbjct 94957 GTCTATCACGGCCCAGAGGGTCT 94979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047495277440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |