Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 1e-11 >seq18 Length=186891 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || |||||||||||||| |||||||||||| | || | || || Sbjct 167203 AACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 167144 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || ||||| || || ||||| ||||| | || | ||||||||||| Sbjct 167143 AAGTTGCTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGGATGCCCTCCTTGTCTTG 167084 Query 34892 AATCTTCTGTTTGACG 34907 |||||| |||||| Sbjct 167083 GATCTTCGACTTGACG 167068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631605938112