Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq476 105 1e-17
>seq476
Length=308794
Score = 105 bits (116), Expect = 1e-17
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||| | ||| || ||||| |||| | || || || ||| ||| | | |||||||||
Sbjct 12367 AGAGAAGGCATGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGA 12426
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
|| ||||||| ||||| || | || || | |||||| || | ||||||||||||
Sbjct 12427 AGGTAAGACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCAC 12486
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302
||||||||| ||||| || || || || || || | | | || | || | ||
Sbjct 12487 TGAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGATTCCT 12546
Query 48303 TGTCTGAGATCCA--GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| |||||| ||| | ||||| || || |||||||||||||| ||
Sbjct 12547 TGTCTTGGATCCATCGGACA--GCCCAATCGGCTTTCTTCTTGATGCAAGG 12595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526931343360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |