Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq104 107 1e-18
>seq104
Length=83277
Score = 107 bits (118), Expect = 1e-18
Identities = 241/362 (67%), Gaps = 0/362 (0%)
Strand=Plus/Plus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
||||| || ||| || | |||||| ||||| | || || || | ||| | || |
Sbjct 47973 TCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGA 48032
Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041
| || || |||||||| |||||| ||||| | ||| || |||| ||||| |||||||
Sbjct 48033 ACCTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCAT 48092
Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101
|| || | ||||| || ||| ||| | || ||||||||||| || |||||
Sbjct 48093 GGCTCAAGGTAGATGGCGAAAGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTA 48152
Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTA 26161
|| || | ||||||||| | ||| ||||| | ||| | || ||||||||| |
Sbjct 48153 GCGGTGTTGTTGAAAACTCGAAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCC 48212
Query 26162 TGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCAT 26221
||| | | || |||| | || |||| ||| | |||||| ||||||||
Sbjct 48213 GCAATATAAGCACCCGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCGTTC 48272
Query 26222 TTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTC 26281
|||||||| |||||| | | ||| ||| | || || | ||||| || | |||
Sbjct 48273 TTTGAAATCATGGCACAAATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTC 48332
Query 26282 AT 26283
||
Sbjct 48333 AT 48334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038445701800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |