Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq104 257 2e-63
seq476 120 4e-22
seq222 111 2e-19
seq311 91.5 2e-13
>seq104
Length=83277
Score = 257 bits (284), Expect = 2e-63
Identities = 1208/1881 (64%), Gaps = 68/1881 (4%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| ||| |||| ||||| ||| || | ||||| | || |||||||||| ||
Sbjct 48568 TACTTCGGTTTCAAGACCCTCGAGC-GATCATATCTCCTCCGCCTCGATGGCAAGATCTG 48510
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| | ||| | ||||| || || |||| |||||||| || || || ||
Sbjct 48509 TGAACGTCCACAACATATGATTATGCGCGTTGCTGTCGGAATCCACGGCGAGGATATCGA 48450
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| | | ||||| ||| || ||||||| ||| || |||| ||||| | ||
Sbjct 48449 GGCTGCCATCGAGACCTACAACTTGATGTCCAGCAAA-TAC-TTCACCCACGCCTCCCCC 48392
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|| |||||| |||||||||||| | || | || ||||||||||||| ||
Sbjct 48391 ACACTCTTCGCAGCTGGTACACCACAGGCACAACTTTCATCCTGCTTCCTTATCGACATG 48332
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||||||| || | |||||||| | || | | ||||| || ||||||
Sbjct 48331 AAGGAGGACAGCATTGATGGTATCTACGACACATTGAAAATTTGTGCCATGATTTCAAAG 48272
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
||||| ||||| || | | | || | | || | || |||| |
Sbjct 48271 AACGCTGGTGGTATCGGTCTCAATGTTCACAGAATCCGTGCGACGGGTGCTTATATTGCG 48212
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| ||||| || | || | || ||| |||| |||||||| || || ||| ||| ||
Sbjct 48211 GGTACAAACGGAAACTCCAACGGAATTGTTCCCATGCTTCGAGTTTTCAACAACACCGCT 48152
Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAA 75616
| ||||| |||||| || | |||| | || | | ||| ||||| | ||
Sbjct 48151 AGATATGTTGATCAAGGTGG---TAACAAGCGTCCTGGTGCTTTCGCCATCTACCTTGAG 48095
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|||||||| || ||| | | ||||||||||| | ||| ||||| || | || |||
Sbjct 48094 CCATGGCACGCAGATGTTTTCGAGTTCCTTGATCTCCGAAAGAACCACGGAAAGGAGGAG 48035
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
| ||| | |||||||| | | || ||||| ||||| || ||||||||||| |||
Sbjct 48034 GTTCGTGCCCGTGATCTCTTCTACGCTCTCTGGATCCCAGATCTCTTCATGAAGCGTGTT 47975
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
|| || | | ||| | | | || || || || || || | ||||||
Sbjct 47974 GAAAAGAACCTTGACTGGACATTGATGTGCCCCAACGAGTGTCCTGGATTGGCCGACGTC 47915
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTAC-ACAAA-----GTATGAAGAGGAGGGTAGAGCC 75850
||||| ||||| || || | || | ||| || ||||| ||||| | |
Sbjct 47914 TACGGTGACGAGTTCGAGGCTTTGTATGAGAAATACGAGTCTGAAGGCAAGGGTCG---C 47858
Query 75851 AATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910
|| || | |||| | ||||| | |||| || | | ||||| |||||
Sbjct 47857 AA---GAGCATCAAAGCCCAAAAGCTTTGGTACTCTATCCTTGAGGCTCAGACTGAGACC 47801
Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970
|||| || | |||||||||||||||||||| ||| |||||||||||||||||| |
Sbjct 47800 GGAAACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGTAACCAAAAGAATCTC 47741
Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030
|| || ||| ||||| || | ||||| || ||| | |||||| | ||||||
Sbjct 47740 GGTACCATCCGAAGCTCCAACTTGTGCACTGAGATTGTCGAGTACTGTGCACCAGATGAG 47681
Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090
|||||||||||||||||||| | || || |||| ||||| | || ||||| |
Sbjct 47680 GTCGCTGTTTGCAATTTGGCATCGCTTGCTCTCCCAACATATGTTGACGAGAAGACTGCC 47621
Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACCG 76149
|||| ||| | |||| || || || || | ||| | || ||| || | ||
Sbjct 47620 ACTTATGACTTCCAAAAGCTCCACGAGGTCTGCCAAG-TAGTCGTCAAGAACTTGAATAA 47562
Query 76150 AGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACA 76206
| || || || | ||| || || |||| || ||||| ||| | || ||
Sbjct 47561 GATTATCGATGTCAACTATTACCCAGTTCCTGAG---GCAAGAAAGAGCAATTTCCGTCA 47505
Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT-TATTTTGTGCCGCTACG 76265
||||||||||| | | |||||||||||||| || |||| || | | | | || |
Sbjct 47504 CAGACCTATTGCTCTCGGTGTTCAAGGTCTTGCTGATGCCTTCTTGGCTCTTCGCCTTC- 47446
Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325
| || || || ||||||||| | | || | ||||| |||||||| || ||||
Sbjct 47445 CTTTCGAGTCTCCAGAAGCCAAGCACCTTAACATCCAAATCTTCGAAACCATTTACCACG 47386
Query 76326 CATCCCTGGAGGCGAGTT--GT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382
| | | | || | || || || ||||| || || ||| | ||||||||||
Sbjct 47385 C-TGCTTTGA--CTGCTTCCGTGGAGTTGGCAAAAATTCATGGTCCATATGAGACATACC 47329
Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA-- 76440
| || || || || ||| | || | ||| || | ||| ||||||| || | ||| |
Sbjct 47328 AAGGCTCACCTGCCTCCAAGGGCGAGCTCCAATATGACATGTGGG-GTGTTACACCTACC 47270
Query 76441 GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500
| || | || |||| | | ||| ||| || | | || | || |||||
Sbjct 47269 GATC-TTTGGGATTGGGCTAGCTTGAAGCAACAGATTGCTCAACACGGCATCCGCAACAG 47211
Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560
| | | | || || |||||||| ||| ||| || || | ||| || || ||
Sbjct 47210 TTTGCTCGTCGCTCCTATGCCAACTGCCAGTACCAGTCAGATTCTTGGTTTCAACGAGTG 47151
Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620
||| || ||||| || | ||||| || || | ||| || || ||||| |
Sbjct 47150 CTTCGAGCCATATACCTCCAACATATATTCTCGACGTGTCCTTGCTGGAGAGTTCCAGGT 47091
Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680
||||||| || | || || || | || || ||||||||| | | |||||
Sbjct 47090 TGTCAACCCATGGCTTCTTAAGGATCTTGTTGATATGGGACTCTGGTCCGATAACATGAA 47031
Query 76681 GGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATG 76736
| | | ||| || ||| ||||| || || |||||| | || |||| |||| ||
Sbjct 47030 GAACCGTATCATTGCTGA----CGGTGGATCAATCCAAAATGTTCCAAATATTCCAGCTG 46975
Query 76737 ATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACAT 76794
|||||||| ||| ||| || || ||||| | ||| | | | | || | | ||
Sbjct 46974 ATATCAAGGCTCTTTACAAGACCGTTTGGGAGATCTCACAACGTACCA--TCGTCCAGAT 46917
Query 76795 GGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAG 76854
||| || || |||||| |||||||||||| |||| ||||| | |||| |
Sbjct 46916 GGCTGCCGACCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATCCACATGAAGGA 46857
Query 76855 TCCAACGATGTCCAAGCTCTCTTCTATGCATAT-GTACGCGTGGAAACAGGGGCTCAAAA 76913
||||| ||| ||| || | ||||||| | | | || ||||| | ||| ||||| |
Sbjct 46856 CCCAACCATGGGTAAGATCACCAGTATGCATTTCGCAGGC-TGGAAGCTGGGTCTCAAGA 46798
Query 76914 CCGGAATGTACTATCTCCGATCAAAGGCGAAAGCC-CG--ACCAATTCAGTTCAGCCTTG 76970
| ||||||||||||||||| | | ||| ||| || ||| || ||||||| | |||
Sbjct 46797 CTGGAATGTACTATCTCCGTACTATGGC---TGCCTCGGCACCTATCCAGTTCACCGTTG 46741
Query 76971 AACCCGAGTGTGTCGCTTGTT 76991
| | ||| | || ||||||
Sbjct 46740 ATCAAGAGGCTCTC-CTTGTT 46721
>seq476
Length=308794
Score = 120 bits (132), Expect = 4e-22
Identities = 296/446 (66%), Gaps = 10/446 (2%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| || | || ||| |||| ||||| ||| ||||||||||||||| || || |
Sbjct 12537 CCTTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCTCTT 12478
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | | || | |||||||||||||| || |||||| | || || |||||| || |
Sbjct 12477 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACG 12418
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT----TGCCGTGGAGCTCTTCAAG 65244
| | || ||||| ||||||||||||||| || || |||| | ||||||
Sbjct 12417 AGTTGATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTT----CTCTTCTCT 12362
Query 65245 ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
||| || | || | | | | | |||| ||| || | | ||||| ||||||
Sbjct 12361 CACTTGAAGCATCGCCCAAGCAAGGCAGCAGTCCAGGCCGTCATCACCGAGGCTGTTGAG 12302
Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364
|||||| ||| |||| | || || || || ||| ||| | || |||||| | |
Sbjct 12301 ATTGAGCAAGAGTTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTGGGCATGAACGCCAAC 12242
Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCC 65423
|||| | |||||||||| || | |||||||||||| | || ||
Sbjct 12241 TTGATGAAGCAATACATTGAGTTCGTCGCCGATCGTCTCCTCCTTTCTCTCGGCAATGAG 12182
Query 65424 ACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483
| ||| || | || ||||| ||||||||||| ||||| |||| || ||
Sbjct 12181 A-AGGTTTACAAGGTTGCCAACCCATTCGACTTTATGGAGAACATCTCTCTTGCAGGAAA 12123
Query 65484 GACCAACTTCTTTGAGAAGCGAGTTG 65509
||| |||||||| |||||||| ||||
Sbjct 12122 GACTAACTTCTTCGAGAAGCGTGTTG 12097
>seq222
Length=1012068
Score = 111 bits (122), Expect = 2e-19
Identities = 161/225 (72%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|| || ||||| |||||||| ||| | || | ||| || ||||| || |||||| |
Sbjct 850812 GGAGCTAAGATTCCCCGAGGAGCCATCCTTTCTGGTCCACCCGGTACTGGTAAGACCTTA 850753
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTC-TGCCGCAAA 175394
|| || |||| || || || || ||| || ||| || || | | || | |
Sbjct 850752 CTAGCAAAGGCCACAGCCGGAGAGTCGGGTGTGCCTTTCTTC-AGCGTTAGTGGTTCCGA 850694
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
|| |||||||||||||||||||| ||||| || ||||| |||||||||| ||| ||
Sbjct 850693 GTTCGTGGAGATGTTTGTTGGTGTTGGTGCTTCCAGAGTTCGAGATCTCTTTGCAATGGC 850634
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
| | | ||| || |||||| ||||||||||||| ||||||||
Sbjct 850633 CAGAAAGAATACCCCTTGTATTATCTTCATTGATGAAATTGATGC 850589
>seq311
Length=439650
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 27861 CTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTG 27920
||| | ||| | |||||| | ||||| || | ||| |||||||| ||||| || |||||
Sbjct 349015 CTCCAAGACCAATTGTGCTACACGATCTCCCTCCTTGACCTCAAAATCTTTCTCGCCGTG 348956
Query 27921 ATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCA 27978
||||||||| | ||||||||||| || ||||||| |||||| || || || |||
Sbjct 348955 ATTGAAGAGGAGGACTTTGACTTGGCCACGGTAGTCGGCATCAATTACGCCTGCGCCA 348898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565841611520
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