Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq18 102 1e-16
>seq18
Length=186891
Score = 102 bits (112), Expect = 1e-16
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || ||||| || ||||| ||||| |||| |||||| || || || || || || ||
Sbjct 167605 ATCCTCCAATTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATACCCTCCTT 167546
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || || | || | ||| ||| || || |||||||||||||| | || ||
Sbjct 167545 ATCCTGGATCTTTGACTTGACATTATCAATTGTGTCCGAAGACTCAACTTCCAATGTAAT 167486
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| || || || | || || ||||||||||||||
Sbjct 167485 AGTCTTGCCCGTCAAAGTCTTGACAAATATTTGCAT 167450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899648732177280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |