Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq18 114 2e-20
>seq18
Length=186891
Score = 114 bits (126), Expect = 2e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || ||||| | || | ||| || ||||| || ||
Sbjct 167451 ATACCACCACGAAGACGAAGGACCAAATGAAGTGTGGACTCCTTTTGGATATTGTAGTCG 167392
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | ||| | || |||||||| || || || ||||| | || |||||||||||||
Sbjct 167391 GACAAGGTTCGGCCATCCTCCAATTGCTTGCCTGCGAAAATGAGTCGCTGTTGGTCAGGT 167332
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || ||||| || || || ||||| || ||||||||||| |||||
Sbjct 167331 GGGATACCCTCCTTATCCTGAATCTTCGACTTTACGTTGTCGATAGTATCTGAAGATTCA 167272
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || | || ||||| || ||||| | || || | ||| || ||||||
Sbjct 167271 ACCTCCAAGGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATTTGCATT 167221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905130297643200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |