Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq476 98.7 3e-15
>seq476
Length=308794
Score = 98.7 bits (108), Expect = 3e-15
Identities = 119/161 (74%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || || || ||||||| || || || | || || || ||| |||| ||||||||
Sbjct 12526 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCT-CTTTCGCCTCCAT 12468
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||||||||| |||||||| || ||| ||||| ||||| ||||| |||||
Sbjct 12467 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 12408
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|| || |||||| | || ||||||||| || |||||||
Sbjct 12407 CCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 12367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588325743320280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |