Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq476 98.7 3e-15 >seq476 Length=308794 Score = 98.7 bits (108), Expect = 3e-15 Identities = 119/161 (74%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || ||||||| || || || | || || || ||| |||| |||||||| Sbjct 12526 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCT-CTTTCGCCTCCAT 12468 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 |||||||||||| |||||||| || ||| ||||| ||||| ||||| ||||| Sbjct 12467 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 12408 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || || |||||| | || ||||||||| || ||||||| Sbjct 12407 CCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 12367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588325743320280