Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq18 84.2 2e-11
>seq18
Length=186891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || |||||| || || || || || | ||| || || |||| |||
Sbjct 167202 ACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCA 167143
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194
|| || || || ||||| || ||||| || ||||| |||||| | || ||| |||||
Sbjct 167142 AGTTGCTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGG-ATGCCCTCCTTGTCTTG 167084
Query 39195 GATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| ||| |||| ||| | | | ||||||||||| || || || | |||||| | |
Sbjct 167083 GATCTTCGACTTGA-CGTTGTCGATGGTATCGCTCGATTCGACCTCGAGGGTGATAGTCT 167025
Query 39254 TTCCCGTCA 39262
| || ||||
Sbjct 167024 TGCCGGTCA 167016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429542961516152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |