Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq18 93.3 3e-14
>seq18
Length=186891
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || | ||||| || || || || | |||||||| || ||
Sbjct 167450 ATGCAAATATTTGTCAAGACTTTGACGGGCAAGACTATTACATTGGAAGTTGAGTCTTCG 167509
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || |||| | | || || || ||| | || ||||| ||
Sbjct 167510 GACACAATTGATAATGTCAAGTCAAAGA-TCCAGGATAAGGAGGGTATTCCACCAGACCA 167568
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || || |||||||| ||| |||| || | || || | ||||||||||
Sbjct 167569 ACAGCGATTGATTTTCGCCGGCAAGCAATTGGAGGATGGCCGTACACTCAGCGATTACAA 167628
Query 23790 CATACAAAAAGAG 23802
||| ||||| |||
Sbjct 167629 CATTCAAAAGGAG 167641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007523776032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |