Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq104 284 2e-71
>seq104
Length=83277
Score = 284 bits (314), Expect = 2e-71
Identities = 1036/1599 (65%), Gaps = 57/1599 (4%)
Strand=Plus/Plus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||| ||||||||||| ||||| || |||||||| |||| || ||||||||| ||
Sbjct 46776 GTACGGAGATAGTACATTCCAGTCTTGAGACCCAGCTTCCAGCCTGCGAAATGCATACTG 46835
Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931
|| | || | || || || || || ||||| || ||| |||||| |||
Sbjct 46836 GTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTGATCAATG 46895
Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991
|| || || | || || ||||| | | ||||| ||| | || ||||||| ||
Sbjct 46896 AATGCACCACGGTCGGCAGCCATCTGGACGATGGTACGTTGTGAGATCTCCCAAACGGTC 46955
Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCT 77048
||| ||| ||||||||| |||||| |||| | ||||| || || ||||| ||
Sbjct 46956 TTGTAAAGAGCCTTGATATCAGCTGGAATATTTGGAACATTTTGGATTGATCCACCGTCA 47015
Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108
| || || ||||| || | ||| ||| | | | | || | | | ||||
Sbjct 47016 GCAATGATACGGTTCTTCATGTTATCGGACCAGAGTCCCATATCAACAAGATCCTTAAGA 47075
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| || || || | || || ||||||| | || | |||| || || || |
Sbjct 47076 AGCCATGGGTTGACAACCTGGAACTCTCCAGCAAGGACACGTCGAGAATATATGTTGGAG 47135
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|||||||| || | | || ||| || | ||| ||| ||| ||||||||||||
Sbjct 47136 GTATATGGCTCGAAGCACTCGTTGAAACCAAGAATCTGACTGGTACTGGCAGTTGGCATA 47195
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTG--ATTTTAT-CTTTTAGATAT 77285
|| || || | ||||| || | || || ||||| | || | | ||| || ||
Sbjct 47196 GGAGCGACGAGCAAACTGTTGCGGATGCC--GTGTTGAGCAATCTGTTGCTTCAAGCTAG 47253
Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345
||||||||||||||| | |||| |||| |||| | || ||||| || || ||
Sbjct 47254 C-CCAATCCCAAAGATCGGTAGGTGTAACACCCCACATGTCATATTGGAGCTCGCCCTTG 47312
Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC-AC--AA 77402
||| ||| || | ||||| ||||| || || | ||| || | || || ||
Sbjct 47313 GAGGCAGGTGAGCCTTGGTATGTCTCATATGGACCATGAATTTTTGCCAACTCCACGGAA 47372
Query 77403 CTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGC 77461
|| ||| || ||| ||||| |||||||| || | | || || | |||| ||
Sbjct 47373 ---GCAGTCAAAGCAGCGTGGTAAATGGTTTCGAAGATTTGGATGTTAAGGTGCTTG-GC 47428
Query 77462 TTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCC 77521
||| | || || ||| | | | | |||||||| || | || ||||| ||
Sbjct 47429 TTCTGGAGACTCGAAAGGAAGGCGAAGAGCCAAGAAGGCATCAGCAAGACCTTGAACACC 47488
Query 77522 AATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATT 77581
| | |||||||||| || | |||| || | || || |||| || ||||| ||
Sbjct 47489 GAGAGCAATAGGTCTGTGACGGAAATTGCTCTTTCTTGCCTCAGGAACTGGGTAATAGTT 47548
Query 77582 AATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAG 77641
| || ||||| ||||| | || | || ||||||| || || | || || |
Sbjct 47549 GACATCGATAATCTTATTCAAGTTCTTGACGACTACTTGGCAGACCTCGTGGAGCTTTTG 47608
Query 77642 AAAATCAAA--------TCTTCCATCTATAACAAACATGTTC--AAAGCTATAGATGCTA 77691
|| ||| | ||||| || |||| | |||| | ||| | ||||| |
Sbjct 47609 GAAGTCATAAGTGGCAGTCTTC--TCGTCAACATA--TGTTGGGAGAGCAAGCGATGCCA 47664
Query 77692 GATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACATAGATTA 77750
||| ||||| || ||||||| | || || || | | ||||| || || | ||
Sbjct 47665 AATTGCAAACAGCGACCTCATCTG-GTGCACAGTACTCGACAATCTCAGTGCACAAGTTG 47723
Query 77751 CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAA 77810
| | ||| || || ||||| | |||||| |||||| ||||| | ||||| |||
Sbjct 47724 GAGCTTCGGATGGTACCGAGATTCTTTTGGTTACTCTTTCGGTTGCAAGCATCCTTGTAA 47783
Query 77811 AGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA 77870
|| || || || | ||||| ||| |||| | || | ||||| | ||| | |
Sbjct 47784 AGCATGAAAGGGTTTCCGGTCTCAGTCTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGG 47843
Query 77871 GCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCA------TATTGAGTATATA--GCC 77922
||||| || | ||| || | || | |||| |||| ||| | |||
Sbjct 47844 GCTTTGATGCTC---TTG---CGACCCTTGCCTTCAGACTCGTATTTCTCATACAAAGCC 47897
Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATG 77982
|| || || || || | || || |||||||||| || || || |||||||||||||
Sbjct 47898 --TCGAACTCGTCACCGTAGACGTCGGCCAATCCAGGACACTCGTTGGGGCACATCAATG 47955
Query 77983 ACCAGTCACCATCTTCCTT--AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040
||||||| | ||| || ||| || ||||| |||||||| || ||||| |||||
Sbjct 47956 TCCAGTCA--AGGTTCTTTTCAACACGCTTCATGAAGAGATCTGGGATCCAGAGAGCGTA 48013
Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100
|| ||||| |||| | | || || ||||| |||||| ||||| || |||||
Sbjct 48014 GAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTTCGGAGATCAAGGAACTC 48073
Query 78101 CATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACC 78160
| || ||| | |||||||| || || || || || | | | ||||| || || |||||
Sbjct 48074 GAAAACATCTGCGTGCCATGGCTCAAGGTAGATGGCGAAAGCACCAGGACGCTTGTTACC 48133
Query 78161 TCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 78220
|| ||||| | |||||| |||||||| || |||||| | ||| |||| ||| |||||
Sbjct 48134 ACCTTGATCAACATATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGAACAATTCCGTT 48193
Query 78221 AGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA--ATGGAT 78278
|| |||| ||||| || | ||||||| || | || || || | | || ||
Sbjct 48194 GGAGTTTCCGTTTGTACCCGCAATATAAGCACCCGTCGCACGGATTCTGTGAACATTGAG 48253
Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338
| || || || || || |||| || || | || ||| ||||||||| |||||||||
Sbjct 48254 A--CCGATACCACCAGCGTTCTTTGAAATCATGGCACAAATTTTCAATGTGTCGTAGATA 48311
Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377
|| || || ||||| ||| |||||| | ||| || |||
Sbjct 48312 CCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGCAG 48350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694664423586560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |