Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq104 313 4e-80
>seq104
Length=83277
Score = 313 bits (346), Expect = 4e-80
Identities = 1328/2068 (64%), Gaps = 46/2068 (2%)
Strand=Plus/Plus
Query 75373 CAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
||||| ||||||| || || | || || | | ||||| ||||||||||| ||||| |
Sbjct 46741 CAACGGTGAACTGGATAGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCT 46800
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| |||||||| |||| || ||||||||| || || | || | || ||
Sbjct 46801 TGAGACCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCT 46860
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
|| || || ||||| || ||| |||||| ||||| || || | || || ||||| |
Sbjct 46861 TCATGTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCT 46920
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| ||||| ||| | || ||||||| || ||| ||| ||||||||| |||
Sbjct 46921 GGACGATGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTG 46980
Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
||| ||||| | ||||| || ||||| || |||| || || ||||| || | ||
Sbjct 46981 GAATATTTGGAACATTTTGGATTGATCCACCGTCAGCAATGATACGGTTCTTCATGTTAT 47040
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| ||| | | | || | | | |||| || || || |||| || || |
Sbjct 47041 CGGACCAGAGTCCCATATCAACAAGATCCTTAAGAAGCCATGGGTTGACAACCTGGAACT 47100
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
|||||| | || | ||||| || || || ||||||||| || | | || |||
Sbjct 47101 CTCCAGCAAGGACACGTCGAGAATATATGTTGGAGGTATATGGCTCGAAGCACTCGTTGA 47160
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
|| | ||| ||| || ||||| |||||||| || || | ||||| || | ||
Sbjct 47161 AACCAAGAATCTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGA 47220
Query 75849 GACCATGTGTTCTG--ATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGATGGTA 75905
|| ||||| | || | | ||| || || ||||||||||||||| | |||
Sbjct 47221 TGCC--GTGTTGAGCAATCTGTTGCTTCAAGCTAGC-CCAATCCCAAAGATCGGTAGGTG 47277
Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTT 75965
|||| |||| | || ||||| || || ||| ||| ||| || | ||||| |
Sbjct 47278 TAACACCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTATGTCT 47337
Query 75966 CGTAAGTCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAA 76022
| || | || | ||| || | || | || | | || ||| ||| ||||
Sbjct 47338 CATATGGACCATGAATTTTTGCCAACTCCACGGAAGCAGTC---AAAGCAGCGTGGTAAA 47394
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAATGT 76081
| |||||||| || | | ||||| | |||| ||||| || || |||||| |
Sbjct 47395 TGGTTTCGAAGATTTGGATGTTAAGGTGCTTG-GCTTCTGGAGACTCGAAAGGAAGGCGA 47453
Query 76082 AAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141
| | | || ||||| || || || ||||| || | | |||||||||| || | |
Sbjct 47454 AGAGCCAAGAAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAA 47513
Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201
||| || || || |||| |||||||| || | ||| ||||| ||||| | ||
Sbjct 47514 TTGCTCTTTCTTGCCTCAGGAACTGGGTAATAGTTGACATCGATAATCTTATTCAAGTTC 47573
Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA-TCTA-TCA 76259
|||| ||||||| || || | || || | || ||| | | || ||| ||
Sbjct 47574 TTGACGACTACTTGGCAGACCTCGTGGAGCTTTTGGAAGTCATAAGTGGCAGTCTTCTCG 47633
Query 76260 CAAACATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315
||||||| ||||| | ||||| | ||| ||||| || ||||||| | |
Sbjct 47634 TCAACATATGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGG-TGC 47692
Query 76316 GCA-TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374
|| || | | ||||| ||||| | || | ||| || || ||||| | |||
Sbjct 47693 ACAGTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTG 47752
Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434
||| |||||| ||| || | ||||| ||||| | || || |||| || ||| ||||
Sbjct 47753 GTTACTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTCTG 47812
Query 76435 TGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTC 76494
| || | ||||| | ||| | | ||||| || | ||| | ||| |
Sbjct 47813 AGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGATGCTC---TTGCGACCCTTGCC 47869
Query 76495 TCTT---TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551
| || |||| ||| || || || || || || | || || |||| ||
Sbjct 47870 TTCAGACTCGTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGGCCAATCC 47929
Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTTCATA 76609
|||||| || || || |||||||||| ||| ||| | ||| || ||| || |||||
Sbjct 47930 AGGACACTCGTTGGGGCACATCAATGTCCAGTCA--AGGTTCTTTTCAACACGCTTCATG 47987
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
|||||||| || ||||| ||||| || ||||| |||| | | || || |||||
Sbjct 47988 AAGAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTTCCG 48047
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
|||||| ||||| |||||||| | || ||| | |||||||| || || || ||
Sbjct 48048 TGGTTCTTTCGGAGATCAAGGAACTCGAAAACATCTGCGTGCCATGGCTCAAGGTAGATG 48107
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | | |||| || || || ||||| || ||||| | |||||| || ||||| || ||
Sbjct 48108 GCGAAAGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTAGCGGTGTTGTTGAAA 48167
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|||| | ||| |||| ||| ||||| || | || ||||| || | ||||||| ||
Sbjct 48168 ACTCGAAGCATGGGAACAATTCCGTTGGAGTTTCCGTTTGTACCCGCAATATAAGCACCC 48227
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
||||| || | || | || || || || || || | || || || | |||
Sbjct 48228 GTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCGTTCTTTGAAATCATGGCA 48287
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969
|| |||||||||||| ||||| || || || || || ||| |||||| | ||| ||
Sbjct 48288 CAAATTTTCAATGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAG 48347
Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029
||| || | ||| || || || || || | ||| || || || || |||
Sbjct 48348 CAGGATGAAAGTTGTGCCTGTGGTGTACCAGCTGCGAAGAGTGTGGGGGAGGCGTGGGTG 48407
Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089
|| |||| || | | ||||| || || || | || || |||||| ||
Sbjct 48408 AAGTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCGCCGTGG 48467
Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG-TCTTATTATTTAT 77148
||||| ||||| || ||||| | |||||| || || ||||| |||| |||| || |
Sbjct 48468 ATTCCGACAGCAACGCGCATAATCATATGTTGTGGACGTTC-ACAGATCTTGCCATCGAG 48526
Query 77149 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 77206
| | |||||| || | || || ||||| || || | ||| ||||| ||
Sbjct 48527 GCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCA 48584
Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC-CATGAC 77265
| ||||| | |||| | || || || | | ||| || || ||||| ||| |||
Sbjct 48585 CGGTCGTAGACAATAGCGGAGTTGAGCTCGGCCTCATGCTTCATAACACAATCGTATGTT 48644
Query 77266 AGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTC 77325
|| | || || || || | | ||| |||| || ||||||| |||| ||
Sbjct 48645 TGT-TTGCTGATCATGGGCGACAATCTCTTGTTTCTAGGGTTGACATAGTGGTATAATTC 48703
Query 77326 TTCCATTACG-TCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTC 77384
|| ||| ||| ||| | || || |||| |||||| |||||||| || || ||||
Sbjct 48704 GGAGATGACGCTCG-AGAATTGCTTCTTGGTTTGCTTGTGGAGATTCGAAACTGCAATTC 48762
Query 77385 TAGCAGCTAGAATTGCATAGTCAGGATG 77412
| || || || || ||||| || || ||
Sbjct 48763 TTGCTGCGAGGATGGCATAATCGGGGTG 48790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929908513280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |