Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq18 84.2 5e-11
>seq18
Length=186891
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||| ||||| |||||||||||| | || | ||||| || |
Sbjct 167656 CAAG-TGCAGAGTGCTCTCCTTTTGAATGTTGTAATCGCTGAGTGTACGGCCATCCTCCA 167598
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| |||||||| || | | ||| ||||| | | || || ||||| || || |
Sbjct 167597 ATTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATACCCTCCTTATCCTGGA 167538
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| |||||| | || | |||| ||| ||| ||||| | |||||||| ||||
Sbjct 167537 TCTTTGACTTGACATTATCAATTGTGTCCGAAGACTCAACTTCCAATGTAATAGTCTTGC 167478
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| | |||||| || || | |||||
Sbjct 167477 CCGTCAAAGTCTTGACAAATATTTGCAT 167450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153813349202184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |