Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 118 2e-21
>seq1406
Length=252419
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||||||||| | ||||| || || || || || || ||| | ||| |||| |
Sbjct 215106 ATGCAAATATTCGTCAAGACCCTCACCGGAAAGACGATCACTCTCGAGGTTGAGTCTTCA 215165
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || ||| ||||| ||||| || ||||| |||||||| |||
Sbjct 215166 GATACTATCGACAATGTGAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCTGACCAA 215225
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || ||||| ||||| || ||||| |||||| | ||||| || || || ||
Sbjct 215226 CAGCGACTCATTTTCGCAGGCAAGCAATTGGAGGATGGCCGAACCTTGTCCGACTACAAC 215285
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| || || || | |||||||| | ||| | || ||||||||
Sbjct 215286 ATCCAAAAGGAGTCCACACTTCATTTGGTCCTTCGTCTTCGTGGTGGTAT 215335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755439814355200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |