Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 82.4 8e-11
>seq1406
Length=252419
Score = 82.4 bits (90), Expect = 8e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | ||| | || | ||| | || ||||| || || ||||| |||||
Sbjct 214821 CCGCCACGAAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAT 214762
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||| |||||||| || || ||| |||||| |||||||||||| || ||
Sbjct 214761 AGAGTACGTCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGTTGCTGATCTGGGGGA 214702
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || || | | || | ||||||| | |||||||
Sbjct 214701 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTGTCGGACGACTCCACC 214642
Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740
|||| ||| | ||||| |||||
Sbjct 214641 TCAAGGGTGATAGTCTTACCGGT 214619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496053371828800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |