Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq843 352 4e-92
seq908 122 1e-22
>seq843
Length=104768
Score = 352 bits (390), Expect = 4e-92
Identities = 1344/2069 (65%), Gaps = 57/2069 (3%)
Strand=Plus/Minus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|||||||||||||| || || || | | ||||| |||||||||||||| || || |||
Sbjct 64934 GTGAATTGAATGGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGA 64875
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 78836
|| || |||| || |||||||||||| || | || || | || || | ||
Sbjct 64874 CCCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTC-AT 64816
Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896
||||| ||||| |||||| |||||| ||||| || || | ||| |||||||| | |
Sbjct 64815 GTGGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGAC 64756
Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956
||| || ||| | || ||||||| || || |||| ||| ||||| | || |
Sbjct 64755 GATGGTACGTTGCGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCCGGGAT 64696
Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013
||||| | || || || ||||||||||| || || || | ||||| || | ||
Sbjct 64695 GTTTGGAACATTTTGGATTGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCGGA 64636
Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073
||| | | | ||| | | | | || || || || || ||||| ||||||||
Sbjct 64635 CCAAAGTCCCATATCGACGAGATCCTTGAGAAGCCATGGGTTGACAACTTGGAATTCTCC 64576
Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133
|| | || | |||| ||| || || ||||||||| || | | || ||| |||
Sbjct 64575 AGCAAGGACACGTCGAGAGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTAAATCC 64516
Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193
| ||||||| || || ||||||||||| || || | ||||| || | | |||
Sbjct 64515 AAGAATTTGACTGGTACTGGCTGTTGGCATAGGAGCGACGAGCAAACTGTTACGGATACC 64456
Query 79194 GTAT-----GATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACA 79248
|| | |||||| | ||| || | |||||||||||||||| | ||
Sbjct 64455 GTGTTGAGAGATCTGTTG----CTTCAAGCTAG-CCCAATCCCAAAGATCGGTAGGTGTG 64401
Query 79249 ACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCA 79308
||| ||| | |||||||| || || ||| || || ||| || || |||
Sbjct 64400 ACACCCCACATGTCATATTGGAGCTCGCCCTTAGAGGCAGGCGAGCCTTGATAAGTCTCA 64341
Query 79309 TAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTT 79368
|| || || | | | || || || || || || ||| ||||||||
Sbjct 64340 TATGGACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAATGGTC 64281
Query 79369 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG 79427
|||||||| | | ||||| | |||| || | || | || || ||| | |||||
Sbjct 64280 TCGAAAATTTGGATGTTGAGGTGCTTGGCCTCCGGGGAT-TCGAAAGGAAGACG-AAGAG 64223
Query 79428 AATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 79486
| || || || || | ||||||||||| | | | |||||||| || | ||| |
Sbjct 64222 CCAAGAAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAATT-G 64164
Query 79487 AAATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545
|||| || || |||| || || || || | ||| ||||| ||||| | ||| ||
Sbjct 64163 CTCTTTCTTGCCTCAGGAACCGGGTAGTAGTTGACATCGATAATCTTATTCAAGTTCTTG 64104
Query 79546 ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTATT-ACAA 79603
|| | |||| | || || | || || | || ||| || | | ||| | | |
Sbjct 64103 ACGACAACTTGGCAGACCTCGTGAAGCTTTTGGAAGTCATAAGTGGCGGTCTTCTCATCA 64044
Query 79604 ACAT--GTTC--AACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659
|||| ||| | || | ||||||| ||| ||||| || ||||||| | | | ||
Sbjct 64043 ACATAGGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGG-TGCACA 63985
Query 79660 -TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718
|| | | ||||||||||| | ||| | ||||| || | ||| | ||| ||
Sbjct 63984 GTACTCGACGATTTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGGTT 63925
Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778
|||||| ||| || |||||||| ||||| ||||| || | || || ||| | ||||
Sbjct 63924 GCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTTTGAGC 63865
Query 79779 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC-TC 79837
|| | || | | ||| | | | || || || | |||| | ||| | ||
Sbjct 63864 CTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGATGCT---CTTGCGACCCTTGCCCTC 63808
Query 79838 TT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGG 79895
||||||| ||| || |||||||||||| || | |||||| | || |||||
Sbjct 63807 AGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACATCGGCCAAACCAGG 63748
Query 79896 ACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAG 79953
||| |||| ||| |||||||| | ||| || || || ||| || || ||||| |||
Sbjct 63747 ACACTCGTTAGGGCACATCAATGTCCAGTCGAGAT--TCTTTTCAACACGCTTCATGAAG 63690
Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013
||||| |||||||| ||||| || ||||| | || | | |||||| |||||
Sbjct 63689 AGATCTGGAATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTTCCATGG 63630
Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073
|||||| || ||||||||| | | || ||| | ||||| || || | ||| |||||
Sbjct 63629 TTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAAGGTAGATGGCG 63570
Query 80074 ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 80133
| | | || || || ||||| || || ||||| | ||||| |||||||| || |||||
Sbjct 63569 AAAGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACT 63510
Query 80134 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG 80193
|| | ||| |||| || || ||||| | || || || |||| |||||| || |
Sbjct 63509 CTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTAGTACCGGCGATATAAGCGCCGGTC 63450
Query 80194 GCACGAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 80251
||||| || | | |||| ||||| || || || || | || || || | ||||
Sbjct 63449 GCACGGATTCTGTGAACATTG--AGACCGATACCACCAGCATTCTTTGAAATCATGGCGC 63392
Query 80252 ATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAAC 80311
| |||||||| || || || || || ||||| || || |||||| | || || |
Sbjct 63391 AAATCTTTAACGTGTCGTAAATACCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGC 63332
Query 80312 AGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370
|| || | || ||| | | || || || || | ||| || || ||||| ||
Sbjct 63331 AGGATGAAAGTT-GTGCCTGTGGTGTGCCAGCTGCGAAGAGGGTTGGGGAGGCGTGGGTG 63273
Query 80371 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTGATG 80429
|| |||| |||| | ||||| ||||| || || | || |||||| || | ||
Sbjct 63272 AAGTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCACCG-TG 63214
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
|||||| ||||| |||||||| | ||| ||||| || | ||| ||||||| || |
Sbjct 63213 AATTCCGACCGCAACACGCATAATCATATGCTGTGGACGTTCGCAGATCTTGCCATCGAG 63154
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 80547
| | || ||| || | || || ||||| || || | || ||||| ||
Sbjct 63153 GCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTGATAGTTGAAA--TCA 63096
Query 80548 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGT 80606
|| ||||| | || | |||||||| | ||| | || |||| ||| ||| |
Sbjct 63095 CGGTCGTAGACGATGGCGGAGTTGAGCTCGGCCTCGTGCTTCATAACACAATCGTATGTT 63036
Query 80607 GATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 80665
| ||| || || || || | || ||| |||||| ||||||| | |||| |
Sbjct 63035 --TGTTTGCTGATCATGGGTGACAATCTCTTGTTTCGAGGATTGACATAGTGGTATAATT 62978
Query 80666 CCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 80724
| || || | | | ||| | || || |||| |||||| || || || || || |||
Sbjct 62977 CGGAGATGAC-GCTCGAGAATTGCTTCTTGGTTTGCTTGTGGAGGTTCGAAACTGCAATT 62919
Query 80725 CTGGCGGCTAAAATGGCATAATCTGGATG 80753
|| || || | ||||||||||| |||||
Sbjct 62918 CTTGCTGCGAGGATGGCATAATCGGGATG 62890
>seq908
Length=77775
Score = 122 bits (134), Expect = 1e-22
Identities = 329/503 (65%), Gaps = 3/503 (1%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| | ||||| || ||||| || || || ||||| | | || || ||
Sbjct 45590 TTTTGGTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTC 45531
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
||||| || || || || |||| ||| || |||| || | | || | | |
Sbjct 45530 TCCATAAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAGGGAAAGGAGG 45471
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| | ||| ||||| || || || ||| ||||||| | ||||| || | ||||
Sbjct 45470 AGACGATCAGCGACGAACTCAATGTATTGCTTCATCAGGTTGGCGTTCATGCCGAGAAGT 45411
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
| ||||||||| |||| | || ||||| ||||| || || || || || |
Sbjct 45410 GCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGACG 45351
Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968
| || | | | || || ||||| ||||| || | | ||||||||
Sbjct 45350 GCCTGGACTGCAGCCTTGCTTGGGCGATGCTTCAAATGGGAGAAGAGAAGGCATGCGAAG 45291
Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028
||| ||| |||||||| || | || || |||||||| || || || || | |||
Sbjct 45290 TCGGTGTGGAGACCCTCATCACGGGAGATCAGCTCGTTGGAGAAGGTAAGACCAGCCATG 45231
Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088
|||||||| || || | ||| || ||||| || || || ||| |||||||| || ||
Sbjct 45230 AGGCCACGTTTCTTCAACCAGAAGATGGAGGCGAAAGAACCACTGAAGAAGATACCCTCA 45171
Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTT 50145
|| ||||| ||||||||||| | | || | ||| | |||| || |||||
Sbjct 45170 ACAGCGGCGAAGGCAACAAGACGTTGGGCAAAGGTGGACTCCTTGTCTTGGATCCATCGG 45111
Query 50146 TGAGCCCAATCGGCCTTCTTTTT 50168
||||||||| |||||||| ||
Sbjct 45110 ACAGCCCAATCAGCCTTCTTCTT 45088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718253411090960
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