Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq843 123 4e-23
>seq843
Length=104768
Score = 123 bits (136), Expect = 4e-23
Identities = 363/554 (66%), Gaps = 4/554 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| ||| ||| || | || || ||||||||| | | ||| || | || |
Sbjct 63472 ACTAACGGAAACTCCAACGGAATCGTTCCTATGCTCAGAGTTTTCAACAACACCGCCA-G 63530
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||| ||| || || || || || || || || ||| | ||| ||||| | || || ||
Sbjct 63531 ATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCTTTCGCCATCTACCTTGAGCCATG 63590
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || ||||| || || |||| | || || ||| ||| || |||| ||
Sbjct 63591 GCACGCCGATGTTTTCGAGTTCCTCGACCTCCGAAAGAACCATGGAAAGGAGGAGGTTCG 63650
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
||| | || | || || || |||||| | |||||| | ||||||||||| || | |
Sbjct 63651 TGCCCGTGATCTCTTCTACGCTCTCTGGATTCCAGATCTCTTCATGAAGCGTGTTGAAAA 63710
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
| | |||||| | |||||||| || || || ||| || ||||| || ||
Sbjct 63711 GAATCTCGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGCCGATGTCTACGG 63770
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAG 97164
|| ||||| || || ||| | |||||| |||||| | || ||| |
Sbjct 63771 TGACGAGTTCGAAGCGTTGTATGAGAAATACGAGTCTGAGGGCAAGGGTCGCAAGA-GCA 63829
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
|| | || | | | || ||| | | ||| | |||||| ||||| |||| || |
Sbjct 63830 TCAAAGCCCAAAAGCTTTGGTACTCTATCCTTGAGGCTCAAACTGAGACCGGAAACCCTT 63889
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| || ||||||||| | || || || ||||||||| | | || ||||||
Sbjct 63890 TCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCAAAAGAATCTCGGTACCATCC 63949
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
||||||| ||||||| ||||| || |||||| | || || ||| || ||||
Sbjct 63950 GAAGCTCCAACTTGTGCACTGAAATCGTCGAGTACTGTGCACCAGATGAGGTCGCTGTTT 64009
Query 97345 GCGTTCTGGCATCG 97358
|| | ||||||||
Sbjct 64010 GCAATTTGGCATCG 64023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741043322806640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |