Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq861 86.0 6e-12
>seq861
Length=344942
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864
|||||| |||| | ||||| | ||||| || || | |||||| ||||| |||
Sbjct 25390 ATCACCCTCGAGGTCGAATCGAGTGACACGATTGATAATGTCAAATCCAAGATCCAGGAC 25449
Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924
|| || || || || || ||||||||| | || || | || ||||||||||||||||||
Sbjct 25450 AAGGAGGGAATTCCCCCTGATCAACAACGCCTAATCTTCGCCGGCAAACAACTCGAAGAC 25509
Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
| | | | || ||||| ||||| || || || || || | ||||| ||| | |
Sbjct 25510 GGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCAACCCTTCATCTCGTCTTACGT 25569
Query 26985 CTTAGAGGAGGA 26996
|| | ||||||
Sbjct 25570 CTACGTGGAGGA 25581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478652144658080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |