Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq908 105 7e-18
>seq908
Length=77775
Score = 105 bits (116), Expect = 7e-18
Identities = 196/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| || |||||||| | || || || | ||||| |||| |||||||| ||||||
Sbjct 44976 ATATAGGTATCGATGAGGAGGGAGTATGTCTCAGAGTGGATGTTCTCCATCATGATTTGG 44917
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
||||||||||| ||| || || | ||| || ||||| || | ||| | |||
Sbjct 44916 AATCCGTAGAAGAATCGGGCCTCGGGGATTTGGACTTCACTGCTGAAGCGCTCGAGGAGG 44857
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| || ||||| || || || || || || || ||||| | | || || || |
Sbjct 44856 TTCTCGTTGACAATCCCGTCAGAGGCAGCGAAGAAAGCGAGGACGTGGGAGATGAAGTAA 44797
Query 93542 TTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
||| ||||| || ||| || | ||| ||| ||||| || || ||||| | |||
Sbjct 44796 CGCTCGTCATCGTTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCT 44737
Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
||| ||||||| || || ||||| || || |||||||| | ||| ||
Sbjct 44736 TCGGCAGTCCAGAATGAAGCTTCGGCCTTCTTGTACATTTGCCAGAT 44690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556848869257360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |