Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq908 185 2e-41
>seq908
Length=77775
Score = 185 bits (204), Expect = 2e-41
Identities = 362/519 (70%), Gaps = 17/519 (3%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691
|||||||| ||||||||||| || ||||| || |||||| | || | | | | ||
Sbjct 45079 CCCTGCATTAAGAAGAAGGCTGATTGGGCTGTCCGATGGATCCA-AGACAAGGAGTCCAC 45137
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | | | | || || ||||| |||| || ||||| ||||||||| || | ||
Sbjct 45138 CTTTGCCCAACGTCTTGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTT 45197
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG--ATGCCCGGACTCACCTTCTCGAAC 42809
|||||||||||||||| | ||| | | ||| | ||| | || || |||||||| |||
Sbjct 45198 CGCCTCCATCTTCTGGTTGAAGAA--ACGTGGCCTCATGGCTGGTCTTACCTTCTCCAAC 45255
Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869
|| || ||| | | || ||||| || || | ||||| || ||||| || ||||| |
Sbjct 45256 GAGCTGATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCTTCTC---C 45312
Query 42870 CACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928
|| | | ||| |||| | |||| |||| |||| ||||||| ||||| || ||
Sbjct 45313 CATTTGAAGCATC-GCCCAAGCAAGGCTGCAGTCCAGGCCGTCATCACCGAGGCTGTTGA 45371
Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCC-CTGGTCGGCATGAACCACG 42987
||| ||| | |||||| | || || | || || ||| | || ||||||||||| |
Sbjct 45372 GATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCT-TGTGCACTTCTCGGCATGAACGCCA 45430
Query 42988 ACCTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCT 43045
|||| ||| |||| ||||| ||| |||||| || | |||||| | | || |
Sbjct 45431 ACCTGATGAAGCAA-TACATTGAGTTCGTCGCTGATCGTCTCCTCCTTTCCCTCGGCAAT 45489
Query 43046 CAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105
|| | | ||||| | ||| ||||||||||||||||||||||| | | ||
Sbjct 45490 GAGAAG-GTTTACAAGGTTGCCAACCCATTCGACTTTATGGAGAACATCTCCCTTGCCGG 45548
Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||| ||||||||||| || || || |||||
Sbjct 45549 AAAGACCAACTTCTTCGAGAAGCGTGTTGCTGATTACCA 45587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944318967532640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |