Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq843 233 2e-56 seq908 122 1e-22 >seq843 Length=104768 Score = 233 bits (258), Expect = 2e-56 Identities = 1132/1776 (64%), Gaps = 61/1776 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||| ||||||||| || ||| | | ||||| |||||||| || |||||||| | Sbjct 64933 TGAATTGAATGGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGAC 64874 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || |||||||| | | |||||| || | ||| | ||||| | |||| Sbjct 64873 CCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGT 64814 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || |||||| ||| |||||||| ||||| ||||| || || ||||| | | | Sbjct 64813 GGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGACGA 64754 Query 113745 CATCCTTCAT--CTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 | | | | | ||| ||||| || || |||| || ||| |||||| | ||||| Sbjct 64753 --TGGTACGTTGCGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCCGGGAT 64696 Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862 | | ||||||||| || ||||| | | || | | |||||| | | || Sbjct 64695 GTTTGGAACATTTTGGATTGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCGGA 64636 Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920 ||| || || || | |||||||| | || ||| | ||||||| || || Sbjct 64635 CCAAAGTCCCATATCGACGAGATCCTTGAGAAGCCATGGGT--TGACAACTTGGAATTCT 64578 Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || || ||| |||| ||| ||||| |||| || |||||||| |||||||| || Sbjct 64577 CCAGCAAGGACACGTCG-AGAGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTAA- 64520 Query 113980 ACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038 | |||||| || | | ||| |||||| ||||| || || | ||| | |||||||||| Sbjct 64519 ATCCAAGAATTTGACTGGTACTGGCTGTTGGCATAGGAGCGACGAGCAAACTGTTACGGA 64460 Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG---TTG--AGCTTTGT 114093 ||| | || || ||| ||| | | |||| || | | | || | || Sbjct 64459 TACCGTGTTGAGAGATCTGTTGCTTCAAGCTAGCCCAATCCCAAAGATCGGTAGGTGTGA 64400 Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153 | |||| |||| ||| | ||||| || | ||||| ||||| || | | | || Sbjct 64399 CACCCC-----ACATGTCATATTGGAGCTCGCCCTTAGAGGCAGGCGAGCCTTGATAAGT 64345 Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213 ||| ||||| || | || || ||||| || | || | || ||||| || || Sbjct 64344 CTCATATGGACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAAT 64285 Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--G 114271 ||||| ||||| | || | ||||||||| ||| || || | || || | Sbjct 64284 GGTCTCGAAAATTTGGATGTTGAGGTGCTTGGCCTCCGGGGATTCGAAAGGAAGACGAAG 64225 Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 | || || |||| || |||||||| |||||||| |||| || | || | | | Sbjct 64224 AGCCAAG--AAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAA 64167 Query 114332 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || ||||| || ||| || || || | || |||||||| | |||| | Sbjct 64166 TTGCTCTTTCTTGC---CTCAGGAACCGGGTAGTAGTTGACATCGATAATCTTATTCAAG 64110 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 || ||| |||||| | || || |||||||||| | | ||| || || |||| Sbjct 64109 TTCTTGACGACAACTTGGCAGACCTCGTGAAGCTTTTGGAAGTCATAAGTGGCGGTCTTC 64050 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 |||| ||||| | || || || | || |||| ||| || |||| | |||||| Sbjct 64049 TCATCAACATAGGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGGT 63990 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| | ||||| || ||||| || || || ||||| || | |||||| Sbjct 63989 GCACAGTACTCGACGATTTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTT 63930 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || |||| ||| || |||||||||||||||||| | || | || ||||| ||| Sbjct 63929 TGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTT 63870 Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 || | || || |||| | ||| | | |||| | || ||| || ||| Sbjct 63869 TGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGA---TGCTCTTG---CGACCC 63816 Query 114689 T---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAG 114742 | |||| |||||| || || | ||||| ||||| ||||| | | || | Sbjct 63815 TTGCCCTCAGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACATCGGCC 63756 Query 114743 AGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTC 114802 | || || || | ||||| | | | ||| | | || |||||||||||| Sbjct 63755 AAACCAGGACACTCGTTAGGGCACATCAATGTCCAGTCGAGATTCTTTTCAACACGCTTC 63696 Query 114803 ATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 114862 |||||||| ||||| ||||||||||| |||||||||| || ||| | || || | Sbjct 63695 ATGAAGAGATCTGGAATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTT 63636 Query 114863 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 114922 || || || || | || | || || | | ||| |||||||| || || ||||| Sbjct 63635 CCATGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAAGGTAG 63576 Query 114923 ACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCA 114976 | |||| | || | |||| |||| | || | ||||| || || ||| Sbjct 63575 ATGGCGAAAGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTG 63519 Query 114977 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATAC 115034 || || || | ||||| |||| ||| || | || | || || || || ||| ||| Sbjct 63518 TTGAAAACTCTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTAGTACCGGCGATATAA 63459 Query 115035 GAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 115094 | | | | || | || || | | | ||| ||||| || || |||||| | Sbjct 63458 GCGCC--GGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCATTCTTTGAAA 63401 Query 115095 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGA 115154 | ||||| | | | || |||| || || || || ||| |||| | ||| Sbjct 63400 TCATGGCGCAAATCTTTAACGTGTCGTAAATACCATCAATGCTGTCCTCCTTCATGTCGA 63341 Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 115214 ||||||||||| || | ||||| | |||||| ||||| |||||||||||| | | Sbjct 63340 TAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTGCCAGCTGCGAAGAGGGTTGGGGAGG 63281 Query 115215 CGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272 ||||| |||| || ||| ||||||| | ||||||||| | | | || || || Sbjct 63280 CGTGGGTGAA-GTA-TTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATC 63223 Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 115308 || |||||||| |||| || || ||||||| ||| Sbjct 63222 CTCACCGTGAATTCCGACCGCAACACGCATAATCAT 63187 >seq908 Length=77775 Score = 122 bits (134), Expect = 1e-22 Identities = 302/458 (66%), Gaps = 18/458 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 45585 GTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTCTCCAT 45526 Query 125818 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG 125872 ||| || |||||||| | ||| || | ||| | || |||| Sbjct 45525 AAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAGGGAAAG-----GAGG 45471 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||| | |||| | | |||||| |||| || Sbjct 45470 AGACGATCAGCGACGAACTCAATGTATTGCTTCATCAGGTTGGCGTTCATGCCGAGAAGT 45411 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || | |||| | | |||||| || || || || | || | Sbjct 45410 GCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGACG 45351 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA--- 126049 || || | | || | || | || |||| |||||| | |||| Sbjct 45350 GCCTGGACTGCAGCCTTGCTTGGGCGATGCTTCAAATGGGAGAAGAG----AAGGCATGC 45295 Query 126050 -AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108 || || |||||||||||| ||||||||||| || || || |||||| || || | Sbjct 45294 GAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAGCTCGTTGGAGAAGGTAAGACCAGC 45235 Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168 |||||| || || |||||||||||||| || | || ||||| ||||||||| || Sbjct 45234 CATGAGGCCACGTTTCTTCAACCAGAAGATGGAGGCGAAAGAACCACTGAAGAAGATACC 45175 Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||| ||| ||||| |||| ||||| | ||||||| Sbjct 45174 CTCAACAGCGGCGAAGGCAACAAGACGTTGGGCAAAGG 45137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340801699120