Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq843 233 2e-56
seq908 122 1e-22
>seq843
Length=104768
Score = 233 bits (258), Expect = 2e-56
Identities = 1132/1776 (64%), Gaps = 61/1776 (3%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
|||| ||||||||| || ||| | | ||||| |||||||| || |||||||| |
Sbjct 64933 TGAATTGAATGGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGAC 64874
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| |||||||| | | |||||| || | ||| | ||||| | ||||
Sbjct 64873 CCAGCTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGT 64814
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| |||||| ||| |||||||| ||||| ||||| || || ||||| | | |
Sbjct 64813 GGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGACGA 64754
Query 113745 CATCCTTCAT--CTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802
| | | | | ||| ||||| || || |||| || ||| |||||| | |||||
Sbjct 64753 --TGGTACGTTGCGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCCGGGAT 64696
Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862
| | ||||||||| || ||||| | | || | | |||||| | | ||
Sbjct 64695 GTTTGGAACATTTTGGATTGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCGGA 64636
Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920
||| || || || | |||||||| | || ||| | ||||||| || ||
Sbjct 64635 CCAAAGTCCCATATCGACGAGATCCTTGAGAAGCCATGGGT--TGACAACTTGGAATTCT 64578
Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979
|| || ||| |||| ||| ||||| |||| || |||||||| |||||||| ||
Sbjct 64577 CCAGCAAGGACACGTCG-AGAGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTAA- 64520
Query 113980 ACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038
| |||||| || | | ||| |||||| ||||| || || | ||| | ||||||||||
Sbjct 64519 ATCCAAGAATTTGACTGGTACTGGCTGTTGGCATAGGAGCGACGAGCAAACTGTTACGGA 64460
Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG---TTG--AGCTTTGT 114093
||| | || || ||| ||| | | |||| || | | | || | ||
Sbjct 64459 TACCGTGTTGAGAGATCTGTTGCTTCAAGCTAGCCCAATCCCAAAGATCGGTAGGTGTGA 64400
Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
| |||| |||| ||| | ||||| || | ||||| ||||| || | | | ||
Sbjct 64399 CACCCC-----ACATGTCATATTGGAGCTCGCCCTTAGAGGCAGGCGAGCCTTGATAAGT 64345
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213
||| ||||| || | || || ||||| || | || | || ||||| || ||
Sbjct 64344 CTCATATGGACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAAT 64285
Query 114214 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--G 114271
||||| ||||| | || | ||||||||| ||| || || | || || |
Sbjct 64284 GGTCTCGAAAATTTGGATGTTGAGGTGCTTGGCCTCCGGGGATTCGAAAGGAAGACGAAG 64225
Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331
| || || |||| || |||||||| |||||||| |||| || | || | | |
Sbjct 64224 AGCCAAG--AAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAA 64167
Query 114332 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388
|| ||||| || ||| || || || | || |||||||| | |||| |
Sbjct 64166 TTGCTCTTTCTTGC---CTCAGGAACCGGGTAGTAGTTGACATCGATAATCTTATTCAAG 64110
Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448
|| ||| |||||| | || || |||||||||| | | ||| || || ||||
Sbjct 64109 TTCTTGACGACAACTTGGCAGACCTCGTGAAGCTTTTGGAAGTCATAAGTGGCGGTCTTC 64050
Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508
|||| ||||| | || || || | || |||| ||| || |||| | ||||||
Sbjct 64049 TCATCAACATAGGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCATCTGGT 63990
Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568
|| |||||| | ||||| || ||||| || || || ||||| || | ||||||
Sbjct 63989 GCACAGTACTCGACGATTTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTT 63930
Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628
|| || |||| ||| || |||||||||||||||||| | || | || ||||| |||
Sbjct 63929 TGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTT 63870
Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688
|| | || || |||| | ||| | | |||| | || ||| || |||
Sbjct 63869 TGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGA---TGCTCTTG---CGACCC 63816
Query 114689 T---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAG 114742
| |||| |||||| || || | ||||| ||||| ||||| | | || |
Sbjct 63815 TTGCCCTCAGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACATCGGCC 63756
Query 114743 AGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTC 114802
| || || || | ||||| | | | ||| | | || ||||||||||||
Sbjct 63755 AAACCAGGACACTCGTTAGGGCACATCAATGTCCAGTCGAGATTCTTTTCAACACGCTTC 63696
Query 114803 ATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 114862
|||||||| ||||| ||||||||||| |||||||||| || ||| | || || |
Sbjct 63695 ATGAAGAGATCTGGAATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTT 63636
Query 114863 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 114922
|| || || || | || | || || | | ||| |||||||| || || |||||
Sbjct 63635 CCATGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAAGGTAG 63576
Query 114923 ACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCA 114976
| |||| | || | |||| |||| | || | ||||| || || |||
Sbjct 63575 ATGGCGAAAGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTGGCGGTGTTG 63519
Query 114977 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATAC 115034
|| || || | ||||| |||| ||| || | || | || || || || ||| |||
Sbjct 63518 TTGAAAACTCTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTAGTACCGGCGATATAA 63459
Query 115035 GAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 115094
| | | | || | || || | | | ||| ||||| || || |||||| |
Sbjct 63458 GCGCC--GGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCATTCTTTGAAA 63401
Query 115095 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGA 115154
| ||||| | | | || |||| || || || || ||| |||| | |||
Sbjct 63400 TCATGGCGCAAATCTTTAACGTGTCGTAAATACCATCAATGCTGTCCTCCTTCATGTCGA 63341
Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 115214
||||||||||| || | ||||| | |||||| ||||| |||||||||||| | |
Sbjct 63340 TAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTGCCAGCTGCGAAGAGGGTTGGGGAGG 63281
Query 115215 CGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272
||||| |||| || ||| ||||||| | ||||||||| | | | || || ||
Sbjct 63280 CGTGGGTGAA-GTA-TTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATC 63223
Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 115308
|| |||||||| |||| || || ||||||| |||
Sbjct 63222 CTCACCGTGAATTCCGACCGCAACACGCATAATCAT 63187
>seq908
Length=77775
Score = 122 bits (134), Expect = 1e-22
Identities = 302/458 (66%), Gaps = 18/458 (4%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || |||| ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 45585 GTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGGGAGATGTTCTCCAT 45526
Query 125818 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG 125872
||| || |||||||| | ||| || | ||| | || ||||
Sbjct 45525 AAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAGGGAAAG-----GAGG 45471
Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
|||||||| | |||| |||||||||| | |||| | | |||||| |||| ||
Sbjct 45470 AGACGATCAGCGACGAACTCAATGTATTGCTTCATCAGGTTGGCGTTCATGCCGAGAAGT 45411
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
||| || || || || | |||| | | |||||| || || || || | || |
Sbjct 45410 GCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGACG 45351
Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA--- 126049
|| || | | || | || | || |||| |||||| | ||||
Sbjct 45350 GCCTGGACTGCAGCCTTGCTTGGGCGATGCTTCAAATGGGAGAAGAG----AAGGCATGC 45295
Query 126050 -AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108
|| || |||||||||||| ||||||||||| || || || |||||| || || |
Sbjct 45294 GAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAGCTCGTTGGAGAAGGTAAGACCAGC 45235
Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168
|||||| || || |||||||||||||| || | || ||||| ||||||||| ||
Sbjct 45234 CATGAGGCCACGTTTCTTCAACCAGAAGATGGAGGCGAAAGAACCACTGAAGAAGATACC 45175
Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
||| ||| ||||| |||| ||||| | |||||||
Sbjct 45174 CTCAACAGCGGCGAAGGCAACAAGACGTTGGGCAAAGG 45137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597340801699120
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