Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1406 82.4 8e-11 >seq1406 Length=252419 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| || ||||| || | | |||||| |||| ||||| ||||| || Sbjct 215074 GTAGATTCCTTTTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTCAAGTTGCTTCCCA 215015 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || | ||| ||||| || || || || || || ||||| || || ||| Sbjct 215014 GCAAAGATAAGTCTCTGTTGGTCAGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTG 214955 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| || || || || | || | ||||||||||||||| || Sbjct 214954 ACGTTGTCGATAGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 214895 Query 64427 TTTAC 64431 || || Sbjct 214894 TTGAC 214890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634095110160