Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq843 181 1e-40
>seq843
Length=104768
Score = 181 bits (200), Expect = 1e-40
Identities = 485/736 (66%), Gaps = 4/736 (1%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| |||| ||||| ||| || || || || | |||| | || || || |||||
Sbjct 63280 GCCTCCCCAACCCTCTTCGCAGCTGGCACACCACAGGCACAACTTTCATCCTGCTTCCTT 63339
Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
|| ||| | |||| ||| ||| || |||| ||||| | ||| || || |
Sbjct 63340 ATCGAC-ATGAAGGAGGACAGCATTGATGGTATTTACGACACGTTAAAGATTTGCGCCAT 63398
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070
|| ||||| | || || || ||||| ||| ||| ||| | ||||| | || |
Sbjct 63399 GATTTCAAAGAATGCTGGTGGTATCGGTCTCAATGTTCACAGAATCCGTGCGACCGGCGC 63458
Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130
|| ||| |||||| || || | ||||||||| |||| ||||||||| | || |||||
Sbjct 63459 TTATATCGCCGGTACTAACGGAAACTCCAACGGAATCGTTCCTATGCTCAGAGTTTTCAA 63518
Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190
|||| | || | || || || || |||||| | | | ||| ||||||| ||||
Sbjct 63519 CAACACCGCCAGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCTTTCGCCATCTA 63578
Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250
|| ||||| |||||||| || || | ||| ||||||| ||||||||||| || ||
Sbjct 63579 CCTTGAGCCATGGCACGCCGATGTTTTCGAGTTCCTCGACCTCCGAAAGAACCATGGAAA 63638
Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
|| || | ||| | || |||||||||||||||||| | ||||| || || |||||
Sbjct 63639 GGAGGAGGTTCGTGCCCGTGATCTCTTCTACGCTCTCTGGATTCCAGATCTCTTCATGAA 63698
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370
|| || || || || || ||||| | | || || || || ||||| || || |
Sbjct 63699 GCGTGTTGAAAAGAATCTCGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGC 63758
Query 94371 CGACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429
||| || | || | || || |||| ||||||| ||||| || |||||||||
Sbjct 63759 CGATGTCTACGG-TGACGAGTTCGAAGCGTTGTATGAGAAATACGAGTCTGAGGGCAAGG 63817
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| ||| || | || ||||| ||| | ||| | || | || ||||
Sbjct 63818 GTCGCAAGAGCATCAAAGCCCAAAAGCTTTGGTACTCTATCCTTGAGGCTCAAACTGAGA 63877
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | || | ||| | | |||||| || |||| ||| |||||| || | |
Sbjct 63878 CCGGAAACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCAAAAGAATC 63937
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
|||| ||| ||||| || ||||||| || || |||||||| | | || || |
Sbjct 63938 TCGGTACCATCCGAAGCTCCAACTTGTGCACTGAAATCGTCGAGTACTGTGCACCAGATG 63997
Query 94610 AGATTGCTGTGTGTAA 94625
|| | ||||| || ||
Sbjct 63998 AGGTCGCTGTTTGCAA 64013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494712600555440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |