Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq908 91.5 2e-13 >seq908 Length=77775 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| || |||||| ||| || ||||| || || ||||| | ||||||||| Sbjct 45308 AAGAGAAGGCATGCGAAGTCGGTGTGGAGACCCTCATCACGGGAGATCAGCTCGTTGGAG 45249 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | || || | ||||| ||||| || | ||| || |||| || |||| ||| Sbjct 45248 AAGGTAAGACCAGCCATGAGGCCACGTTTCTTCAACCAGAAGATGGAGGCGAAAGAACCA 45189 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || ||||| ||||| || || || || || || || | | |||| | || | Sbjct 45188 CTGAAGAAGATACCCTCAACAGCGGCGAAGGCAACAAGACGTTGGGCAAAGGTGGACTCC 45129 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131 |||| ||| |||| | ||||| ||||||||||| Sbjct 45128 TTGTCTTGGATCCATCGGACAGCCCAATCAGCCTTCTT 45091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138163799840