Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq843 168 8e-37
>seq843
Length=104768
Score = 168 bits (186), Expect = 8e-37
Identities = 1112/1758 (63%), Gaps = 75/1758 (4%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATAC- 109558
|||||| || ||||| ||||| |||||| |||||| || || ||||| | || |||
Sbjct 64809 GTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGACGATGGT 64750
Query 109559 ACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCC 109617
|| || || | || ||||| || |||||||| | | |||||||||| | || ||||
Sbjct 64749 ACGTT--GCGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCCGGGATGTTT 64692
Query 109618 ACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGA 109673
| ||||| || || |||||| ||| || ||| | | |||||| | | ||
Sbjct 64691 GGAACATTTTGGATTGATCCACCA----TCAGCAATGATACGGTTCTTCATGTTGTCGGA 64636
Query 109674 CCAGAGACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCA 109731
||| || || | | |||||| | | ||| ||| |||||| || |||||
Sbjct 64635 CCAAAGTCCCATATCGACGAGATCCTTGAGAAGCCATGG--GTTGACAACTTGGAATTCT 64578
Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791
|||||||| ||||| ||||||||| | || || || ||||| ||||| ||
Sbjct 64577 CCAGCAAGGACACGTCGAGAGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTAAAT 64518
Query 109792 CCTAGGATTTGTGCAGTGGAA---GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGG 109848
|| || ||||| | ||| | ||||| ||||| ||||| | ||| | |||||| |||
Sbjct 64517 CCAAGAATTTG---ACTGGTACTGGCTGTTGGCATAGGAGCGACGAGCAAACTGTTACGG 64461
Query 109849 AGACCCT-TCG-----TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTA 109902
| ||| | | | ||| | | ||| || | || |||||| || || | ||
Sbjct 64460 ATACCGTGTTGAGAGATCTGTTGCT--TCAAGC-TAGC---CCAATCCCAAAGATCGGTA 64407
Query 109903 AATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCC 109962
| || |||| |||||| || ||| || | |||| || ||||| || ||
Sbjct 64406 GGT---GTGACACC---CCACATGTCATATTGGAGCTCGCCCTTAGAGGCAGGCGAGCC- 64354
Query 109963 TTGA-AACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGC 110021
|||| || |||| || | || | || || |||||||| ||||| | || ||
Sbjct 64353 TTGATAAGTCTCATATGGACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGC 64294
Query 110022 ATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGG 110081
|| || || ||||| ||||| || || | | | | ||| | ||||| ||
Sbjct 64293 GTGGTAAATGGTCTCGAAAATTTGGATGTTGAGGTGCTTGGCCTCCGGGGATTCGAAAGG 64234
Query 110082 AAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATG 110141
||||| | | | || |||| || ||||| |||||||||||| |||| || | ||
Sbjct 64233 AAGACGAAGAGCCAAGAAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTG 64174
Query 110142 CTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATT 110201
| || || || || ||||| ||||| ||||| | | |||
Sbjct 64173 ACGGAAATTGCTCTTTCTTGCCTCAGGAACCGGGTAGTAGTTGACATCGATAATCTTATT 64114
Query 110202 GAGATTCTTCGTCACAGTCTTCGT-GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCG 110260
| ||||| ||| ||| | || || || || || | | | || | || |
Sbjct 64113 CAAGTTCTTGACGACAA-CTTGGCAGACCTCGTGAAGCTTTTGGAAGTCATAAGTGGCGG 64055
Query 110261 TCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGT 110320
||| || || ||||| | |||||||||| || || | |||||| |||| ||| |
Sbjct 64054 TCTTCTCATCAACATAGGTTGGGAGAGCAAGCGATGCCAAATTGCAAACAGCGACCTCAT 63995
Query 110321 CTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGT 110380
|| | ||| || | ||||| || ||||||||||| || ||| ||| | |
Sbjct 63994 CTGGTGCACAGTACTCGACGATTTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGAT 63935
Query 110381 TCTTCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTT 110439
|||| || || | ||| | |||||| |||||||| || |||||| | ||| | || ||
Sbjct 63934 TCTTTTGGTTGCTCTTTCG-GTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTC 63876
Query 110440 TCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCG 110499
|| || || | || || || | | ||| | | ||| || ||| | |||
Sbjct 63875 TCAGTTTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTGA----TGCTCTTGCG 63820
Query 110500 AGACCTT--CCTC---CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACAT 110554
| |||| |||| |||||| || ||||| | || || || | ||||| ||||
Sbjct 63819 AC-CCTTGCCCTCAGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACAT 63761
Query 110555 CAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCC 110614
| | | ||| || || || || | | | ||| | | || ||||| |
Sbjct 63760 CGGCCAAACCAGGACACTCGTTAGGGCACATCAATGTCCAGTCGAGATTCTTTTCAACAC 63701
Query 110615 TCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTT 110674
||||||||| || || |||||||| | || |||| || |||||| |||| |||| |
Sbjct 63700 GCTTCATGAAGAGATCTGGAATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCT 63641
Query 110675 CATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGA 110734
| | || ||||| || || || | || || | | ||| | ||||||||| || |
Sbjct 63640 CCTTTCCATGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAA 63581
Query 110735 GATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTG 110788
| |||| |||| | || | |||| ||| | || | |||||| | || |
Sbjct 63580 GGTAGATGGCGAAAGCACC---AGGACGCTTGTTACCACCTTGATCAACATATCTGGCGG 63524
Query 110789 TGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAA 110848
|| ||||| || ||||||||||||| ||||| | ||| | || || ||||| |
Sbjct 63523 TGTTGTTGAAAACTCTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTAGTACCGGCGA 63464
Query 110849 TTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTAC 110908
| | | ||||| || ||| | || | ||| |||||||| || |||
Sbjct 63463 TATAAGCGCCGGTCGCACGGATTCTGTGAACATTGAGACCGATACCACCAGCATTCTTTG 63404
Query 110909 TAAT--TTGTGCACACTCTGTGA-GTGTACCATAAATACCATCAATCGAATCTGCCTTGT 110965
||| | | ||| | ||| | | |||| | |||||||||||||| || ||||
Sbjct 63403 AAATCATGGCGCA-AATCTTTAACGTGT--CGTAAATACCATCAATGCTGTCCTCCTTCA 63347
Query 110966 TGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAG 111025
|| | || || ||||| || || | || | | || || || || |||||| || |
Sbjct 63346 TGTCGATAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTGCCAGCTGCGAAGAGGGTTG 63287
Query 111026 GTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083
| | || || ||| || ||| ||||||| |||||| || |||| || |
Sbjct 63286 GGGAGGCGTGGGTGA--AGTATTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTC 63229
Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143
| ||| | ||||||||| || | ||||| ||||| | ||||| || || ||||
Sbjct 63228 GATATCCTCACCGTGAATTCCGACCGCAACACGCATAATCATATGCTGTGGACGTTCGCA 63169
Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCC 111203
| ||| ||||| | || | || || ||| |||||||||| ||| ||||||
Sbjct 63168 GATCTTGCCATCGAGGCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCGAAGTATTG 63109
Query 111204 AAAATCGAAATCACGATC 111221
| | | ||||||||| ||
Sbjct 63108 ATAGTTGAAATCACGGTC 63091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588963381189200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |