Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1395 131 2e-25
>seq1395
Length=211398
Score = 131 bits (144), Expect = 2e-25
Identities = 193/272 (71%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481
|| ||||| | |||| | ||||| |||||| ||||| | ||||| || |||||||||
Sbjct 85662 GATATTGCATTTGGTAATGCCCAAAGATTTGGTGTTCCTTTTGGATATGGTGGTCCTCAT 85603
Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGA---ATTGTA 158538
||||| |||||||| | ||||| |||||| | || || || || | |||| |
Sbjct 85602 GCTGCTTTCTTTGCCGTTAGCGACAAATATAAGCGGAAAATTCCAGGACGCCTCATTGGA 85543
Query 158539 GGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAG 158598
| | ||| |||||| || | || || ||||| ||||| |||||| |||||
Sbjct 85542 GTT---TCAAAAGATAGACTTGGAGACAAGGCGATGAGATTGGCACTTCAGACTCGAGAG 85486
Query 158599 CAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCT 158658
|| |||||| ||||||| || || ||||| || | ||||||||||| || | || ||
Sbjct 85485 CAACATATCCGAAGAGAAAAGGCTACCAGCAATGTATGCACAGCACAGGCGTTACTTGCA 85426
Query 158659 AATATGTCTGGGTTCTATGCAGCATATCATGG 158690
|||||| || ||||| || | ||||| ||
Sbjct 85425 AATATGAGTGCTTTCTACGCTGTCTATCACGG 85394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588038601003040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |