Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 86.0 4e-12
>seq1406
Length=252419
Score = 86.0 bits (94), Expect = 4e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || ||| || || || || |||||||||||| | || | || ||
Sbjct 215087 AACCAAGTGTAGAGTAGATTCCTTTTGGATATTGTAGTCCGAAAGGGTGCGGCCGTCCTC 215028
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|| || || || ||||| || |||| || ||||| | || | |||||||||||
Sbjct 215027 AAGTTGCTTCCCAGCAAAGATAAGTCTCTGTTGGTCAGGTGGGATGCCCTCCTTGTCTTG 214968
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||||| |||||| | || | || || |||||| |||| ||| ||||| ||
Sbjct 214967 AATCTTCGACTTGACGTTGTCGATAGTATCCGAGGACTCAACCTCGAGGGTGATGGTCTT 214908
Query 34952 TCCCGTGAGAGTCTTCACAA 34971
|| || | ||||| ||||
Sbjct 214907 GCCGGTCAAGGTCTTGACAA 214888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324626818606992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |