Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq843 248 1e-60
seq908 134 2e-26
seq927 107 2e-18
seq567 84.2 3e-11
>seq843
Length=104768
Score = 248 bits (274), Expect = 1e-60
Identities = 1173/1824 (64%), Gaps = 71/1824 (4%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| ||| |||| ||||| ||| || | ||||| | || |||||||||| ||
Sbjct 63112 TACTTCGGTTTCAAGACCCTCGAGC-GATCATATCTCCTCCGCCTCGATGGCAAGATCTG 63170
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| |||||| | ||| | ||||| || || |||| || ||||| || || || ||
Sbjct 63171 CGAACGTCCACAGCATATGATTATGCGTGTTGCGGTCGGAATTCACGGTGAGGATATCGA 63230
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| | | ||||| ||| || ||||||| ||| || |||| ||||| | |||
Sbjct 63231 GGCTGCCATCGAGACCTACAACTTGATGTCCAGCAAA-TAC-TTCACCCACGCCTCCCCA 63288
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
||||||||| ||||| |||||| | || | || ||||||||||||| ||
Sbjct 63289 ACCCTCTTCGCAGCTGGCACACCACAGGCACAACTTTCATCCTGCTTCCTTATCGACATG 63348
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAA 75440
||||||||| || | ||||| || | || ||| || | ||||| | || ||||
Sbjct 63349 AAGGAGGACAGCATTGATGGTATTTACGACACG-TTAAAGATT-TGCGCCATGATTTCAA 63406
Query 75441 AGTGGGCTGGGGGTATTGGG----ATGCACATCCATGAT--GTGAGAGCCAATAAATCTC 75494
|| ||||| ||||| || ||| || || || ||| || | | |
Sbjct 63407 AGAATGCTGGTGGTATCGGTCTCAATGTTCA--CAGAATCCGTGCGACCGG------CGC 63458
Query 75495 GTAT-TCGGGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAA 75552
||| ||| || || || || | || | || || |||| ||||| | || || ||
Sbjct 63459 TTATATCGCCGGTACTAACGGAAACTCCAACGGAATCGTTCCTATGCTCAGAGTTTTCAA 63518
Query 75553 CGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGT 75606
| ||| || | ||||| |||||| || | |||| | || | | ||| |
Sbjct 63519 CAACACCGCCAGATATGTTGATCAAGGTGG---TAACAAGCGTCCTGGTGCTTTCGCCAT 63575
Query 75607 CTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGG 75666
|||| | || |||||||| |||||| | | |||||||| || | ||| ||||| ||
Sbjct 63576 CTACCTTGAGCCATGGCACGCCGATGTTTTCGAGTTCCTCGACCTCCGAAAGAACCATGG 63635
Query 75667 TGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCAT 75726
| || |||| ||| | |||||||| | | || ||||||||||| || |||||
Sbjct 63636 AAAGGAGGAGGTTCGTGCCCGTGATCTCTTCTACGCTCTCTGGATTCCAGATCTCTTCAT 63695
Query 75727 GAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCT 75786
|||||| ||||| || | | ||| | | | || || || || || ||| |
Sbjct 63696 GAAGCGTGTTGAAAAGAATCTCGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTT 63755
Query 75787 CTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA- 75845
|||| | ||||| ||||| ||||| | || || || || ||||| |
Sbjct 63756 GGCCGATGTCTACGGTGACGAGTTCGAAGCGTTGTATGAGAAATACGAGTCTGAGGGCAA 63815
Query 75846 GAGCCAATGCGACTGTACCA--GCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGAC 75903
| | | || | | | || ||| | ||||| | |||| || | | || ||
Sbjct 63816 GGGTC---GCAAGAGCATCAAAGCCCAAAAGCTTTGGTACTCTATCCTTGAGGCTCAAAC 63872
Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963
||||| |||| || | |||||||||||||||||||| ||| ||||| ||||||||
Sbjct 63873 TGAGACCGGAAACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCAAAA 63932
Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023
|||| | || || ||| ||||| || | ||||| ||||| | |||||| |
Sbjct 63933 GAATCTCGGTACCATCCGAAGCTCCAACTTGTGCACTGAAATCGTCGAGTACTGTGCACC 63992
Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA 76083
|||||| |||||||||||||||||||| | || || |||| ||||| |||| |
Sbjct 63993 AGATGAGGTCGCTGTTTGCAATTTGGCATCGCTTGCTCTCCCAACCTATGTTGATGAGAA 64052
Query 76084 GACTCGCACTTTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATC 76142
||| ||||| ||| | |||| ||||| || || | ||| |||| ||| ||
Sbjct 64053 GACCGCCACTTATGACTTCCAAAAGCTTCACGAGGTCTGCCAAG-TTGTCGTCAAGAACT 64111
Query 76143 TAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATA 76199
| || | || || || | || || || |||| || ||||| |||
Sbjct 64112 TGAATAAGATTATCGATGTCAACTACTACCCGGTTCCTGAG---GCAAGAAAGAGCAATT 64168
Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT-TATTTTGTGC 76258
| || ||||||||||||| | | |||||||||||||| || |||| || | | | |
Sbjct 64169 TCCGTCACAGACCTATTGCTCTCGGTGTTCAAGGTCTTGCTGATGCCTTCTTGGCTCTTC 64228
Query 76259 CGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATG 76318
|| | | || || || || |||||| | | || | || || || |||||
Sbjct 64229 GTCTTC-CTTTCGAATCCCCGGAGGCCAAGCACCTCAACATCCAAATTTTCGAGACCATT 64287
Query 76319 TATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACA 76378
|| ||||| | || || || ||||| | || ||| | ||||||||
Sbjct 64288 TACCACGCTGCTTTGACTGCTTCCATGGAGTTGGCAAAGATTCATGGTCCATATGAGACT 64347
Query 76379 TTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC 76438
| | | || || || || || | || | ||| || | ||| ||||||| || | |||
Sbjct 64348 TATCAAGGCTCGCCTGCCTCTAAGGGCGAGCTCCAATATGACATGTGGG-GTGTCACACC 64406
Query 76439 AA--GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTA 76496
| | || | || |||| | | ||| ||| ||| | | ||| | ||||
Sbjct 64407 TACCGATC-TTTGGGATTGGGCTAGCTTGAAGCAACAGATCTCTCAACACGGTATCCGTA 64465
Query 76497 ACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAAT 76555
||||| | | | || || |||||||||||| ||| |||| |||||| | |||
Sbjct 64466 ACAGTTTGCTCGTCGCTCCTATGCCAACAGCCAGTACCAGTCAAATTCTTGGAT-TTAAC 64524
Query 76556 GAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTT 76615
|| ||||| || ||||| || | ||||||||| || | ||| || || || ||
Sbjct 64525 GAGTGCTTCGAGCCATATACCTCCAACATCTACTCTCGACGTGTCCTTGCTGGAGAATTC 64584
Query 76616 GTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGAT 76675
|||||||| || |||| || ||| | || || || |||||| | |
Sbjct 64585 CAAGTTGTCAACCCATGGCTTCTCAAGGATCTCGTCGATATGGGACTTTGGTCCGACAAC 64644
Query 76676 ATGAAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCC 76731
|||||| | | ||| || ||| ||||| || || |||||| | || | |||||
Sbjct 64645 ATGAAGAACCGTATCATTGCTGA----TGGTGGATCAATCCAAAATGTTCCAAACATCCC 64700
Query 76732 AGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAG--ATGAAAGATGTCATT 76789
| |||||||||| ||| ||| || || ||||| ||| | | | | | || |
Sbjct 64701 GGCTGATATCAAGGCTCTTTACAAGACCGTTTGGGAGATCTCGCAACGTACCA--TCGTC 64758
Query 76790 GACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG 76849
| ||||| || || |||||| |||||||||||| |||| ||||| | ||||
Sbjct 64759 CAGATGGCTGCCGACCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATCCACATG 64818
Query 76850 GAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATAT-GTACGCGTGGAAACAGGGGCT 76908
| ||||| ||| ||| || | ||||||| | | | || ||||| | ||| ||
Sbjct 64819 AAGGACCCAACCATGGGTAAGATCACCAGTATGCATTTCGCAGGC-TGGAAGCTGGGTCT 64877
Query 76909 CAAAACCGGAATGTACTATCTCCG 76932
||| || |||||||||||||||||
Sbjct 64878 CAAGACTGGAATGTACTATCTCCG 64901
>seq908
Length=77775
Score = 134 bits (148), Expect = 2e-26
Identities = 338/508 (67%), Gaps = 12/508 (2%)
Strand=Plus/Plus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
|| || || ||| |||||||||| | ||||| | |||| | | |||| | ||
Sbjct 45076 GTTCCCTGCATTAAGAAGAAGGCTGATTGGGCTGTCCGATGGATCCAAGACAAGGAGTC- 45134
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| |||| ||| | || ||| |||| || || ||| ||||||||||||||| || ||
Sbjct 45135 CACCTTTGCCCAACGTCTTGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTC 45194
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | | || | ||||||||||| || || |||||| | || || |||||| ||
Sbjct 45195 TTTCGCCTCCATCTTCTGGTTGAAGAAACGTGGCCTCATGGCTGGTCTTACCTTCTCCAA 45254
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT----TGCCGTGGAGCTCTTCA 65242
|| || || ||||| ||||||||||||||| || || |||| | ||||||
Sbjct 45255 CGAGCTGATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTT----CTCTTCT 45310
Query 65243 AGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTG 65302
|||| || | || | | | | |||| ||| || | | ||||| ||||
Sbjct 45311 CCCATTTGAAGCATCGCCCAAGCAAGGCTGCAGTCCAGGCCGTCATCACCGAGGCTGTTG 45370
Query 65303 AGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|||||||| ||| |||| | || || || || ||| || |||| |||||| |
Sbjct 45371 AGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCACTTCTCGGCATGAACGCCA 45430
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTG 65421
| |||| | |||||||||| || | |||||||||||| | || ||
Sbjct 45431 ACCTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTCCTCCTTTCCCTCGGCAATG 45490
Query 65422 CCACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481
| ||| || | || ||||| ||||||||||| ||||| ||||| ||
Sbjct 45491 AGA-AGGTTTACAAGGTTGCCAACCCATTCGACTTTATGGAGAACATCTCCCTTGCCGGA 45549
Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTG 65509
|||||||||||||| |||||||| ||||
Sbjct 45550 AAGACCAACTTCTTCGAGAAGCGTGTTG 45577
>seq927
Length=373674
Score = 107 bits (118), Expect = 2e-18
Identities = 221/323 (68%), Gaps = 18/323 (6%)
Strand=Plus/Minus
Query 175186 TTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATT-GTGGATTT 175244
|||| ||||||| ||| || |||| ||||| |||| | | | | ||| || ||
Sbjct 176138 TTCAAGGATGTTGCGGGTATGGACGAAGCCAA-GATGGAGATTATGGAATTCGTTTCATT 176080
Query 175245 TCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATCCCCCGAGGCGCCCT 175301
||| ||| ||| ||| || | | ||| ||||| |||||||| ||||| ||| |
Sbjct 176079 TCTAAAGACACCTGAGCAAT---TCGAAAGATTGGGTGCTAAGATCCCTCGAGGAGCCAT 176023
Query 175302 TCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATC 175361
|| | ||| || ||||| || ||||| | || || |||| || || |||||
Sbjct 176022 CCTTTCTGGTCCACCTGGTACCGGTAAGACTTTACTAGCAAAGGCCACAGCCGGAGAATC 175963
Query 175362 AAATGTCCCATTCATC-----CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGT 175416
||| || ||| || ||||| | ||| | ||||||||||||||||| |||
Sbjct 175962 GGGTGTACCTTTCTTCAGCGTCAGTGGTT--CCG---AGTTTGTGGAGATGTTTGTCGGT 175908
Query 175417 GTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATT 175476
|| ||||| || ||||| |||||||| | || ||| | | ||| || ||||||
Sbjct 175907 GTTGGTGCTTCCAGAGTTCGAGATCTCTTCGCGATGGCCAGAAAGAATACCCCTTGTATT 175848
Query 175477 GTCTTCATTGATGAGATTGATGC 175499
|||||||||| |||||||||||
Sbjct 175847 ATCTTCATTGACGAGATTGATGC 175825
>seq567
Length=145468
Score = 84.2 bits (92), Expect = 3e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 27790 CCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTTCCTGCACATCGGGT 27849
|||||||| ||||| || || | ||||||| | | | ||| || ||||||
Sbjct 88795 CCAAATCCTCCCGCTCCCCTAACGCTCTCTTCCAATTCCTGGACCTCCAAGACCTCGGGT 88736
Query 27850 GTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCT 27909
|| | | ||| | ||| | ||| || | ||||| || | ||| ||||| || |||
Sbjct 88735 GTGTAGATTCTCTCCAAGACCAATTGAGCTACACGATCTCCCTCCTTGACCTCGAAATCT 88676
Query 27910 TTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACA 27969
|| || |||||||||||||| | ||||||||||| || ||||| | |||||| |||
Sbjct 88675 TTCTCGCCGTGATTGAAGAGGAGGACTTTGACTTGGCCACGGTAGTCAGCATCAATTACA 88616
Query 27970 CCCGCACCA 27978
|| || |||
Sbjct 88615 CCTGCGCCA 88607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596556818496320
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