Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 82.4 7e-11
>seq1406
Length=252419
Score = 82.4 bits (90), Expect = 7e-11
Identities = 125/176 (71%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
||||||||| ||||| || |||||||| || | | ||| |||||||||||||||
Sbjct 214792 GGTGGACTCCTTCTGGATGTTGTAATCAG--ATAGAGTACGTCCGTCCTCGAGCTGCTTT 214735
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| || | || | || ||||| || || || || || |||||||| |||||| |
Sbjct 214734 CCGGCAAAGATCAAACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGAC 214675
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | || | ||||||| | |||||| || | ||||| || || |||||
Sbjct 214674 TTGACGTTATCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCGGT 214619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483410442709360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |