Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1406 82.4 7e-11 >seq1406 Length=252419 Score = 82.4 bits (90), Expect = 7e-11 Identities = 125/176 (71%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || |||||||| || | | ||| ||||||||||||||| Sbjct 214792 GGTGGACTCCTTCTGGATGTTGTAATCAG--ATAGAGTACGTCCGTCCTCGAGCTGCTTT 214735 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || | || ||||| || || || || || |||||||| |||||| | Sbjct 214734 CCGGCAAAGATCAAACGTTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGAC 214675 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | ||||||| | |||||| || | ||||| || || ||||| Sbjct 214674 TTGACGTTATCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCGGT 214619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483410442709360