Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq927 84.2 5e-11 >seq927 Length=373674 Score = 84.2 bits (92), Expect = 5e-11 Identities = 166/244 (68%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 101537 TCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAGG 101596 ||||| ||||| |||| |||||||| | ||| |||| | | | |||||||||| Sbjct 267195 TCAGCAACCTTTCGGACATAATTGTGACGCTTTTCCTCACGAAGACGGGCGAAACGAAGA 267136 Query 101597 GCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAATT 101656 || |||||||| || | ||||| ||||| || | | || ||| || || | || Sbjct 267135 GCGGATTGTCCACCACGACCGTGCTTCTTGGGGAGATCAACTGAAAATTTGTGGACAACG 267076 Query 101657 TTCTTGGTGTTCCCAGAGAGAGTCGCGAAAAGAGCAGAAGAACCGTCAAGAATAATAAAT 101716 | |||||| ||| ||| || ||||||| || ||| || | |||||||||| Sbjct 267075 TCGCGGGTGTTTCCACTGAGGGTTCCGAAAAGCGCTCCGTTACCATCCATAATAATAAAT 267016 Query 101717 CCGAATACATCGGA--AGATGTCAGAAGTTCAGAGAGACACTCGATATGGAATGAACTGT 101774 || ||| || || || ||||||||| | |||| |||| |||||||| ||| Sbjct 267015 CCAAAT--TTCTGATCCGACTCCAGAAGTTCGGCGAGAGCCTCGGTATGGAATTTGTTGT 266958 Query 101775 CGCA 101778 |||| Sbjct 266957 CGCA 266954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181794846476594