Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1406 93.3 4e-14
>seq1406
Length=252419
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/233 (69%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 27017 ATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT 27075
|||| ||||| |||| || | ||||| || || || || ||||| || || || |
Sbjct 215565 ATTGTCCTCCACGCAGGCGAAGCACCAAGTGCAAAGTGCTCTCCTTTTGGATGTTATAAT 215506
Query 27076 CGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135
|||| | | || | || || | || || |||||| |||| | ||||||||||| |
Sbjct 215505 CGCTGAGTGTACGGCCATCCTCCAATTGCTTGCCGGCGAAAATCAATCGCTGTTGATCTG 215446
Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195
| || | |||||| ||||| |||||| || | | || | ||||| | | |
Sbjct 215445 GTGGGATACCCTCCTTATCCTGGATCTTTGACTTGACATTATCAATGGTGTCCGAAGACT 215386
Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||||||| || |||| |||||||||| ||| || || ||||| ||||||
Sbjct 215385 CAACTTCTAATGTAATAGTCTTGCCCGTCAAAGTCTTAACGAAGATCTGCATA 215333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424925523385968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |