Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq843 250 3e-61
seq908 125 8e-24
>seq843
Length=104768
Score = 250 bits (276), Expect = 3e-61
Identities = 1108/1729 (64%), Gaps = 49/1729 (3%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| || | ||||||||| || |||||||||||| |||||| || | ||||||||
Sbjct 64904 GTACGGAGATAGTACATTCCAGTCTTGAGACCCAGCTTCCAGCCTGCGAAATGCATACTG 64845
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| | ||| ||| | |||| || |||| |||||| | || || || || || |||
Sbjct 64844 GTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTGATCAATG 64785
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
| ||||| |||||||| ||||| | || || | ||||| |||||||| | ||||
Sbjct 64784 AATGCACCACGGTCGGCAGCCATCTGGACGATGGTACGTTGCGAGATCTCCCAAACGGTC 64725
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTC---CCACCGGCT 78426
||||| ||||| | || || |||||| | | | | | | ||||| |
Sbjct 64724 TTGTAAAGAGCCTTGATATCAGCCGGGATGTTTGGAACATTTTGGATTGATCCACCATCA 64665
Query 78427 CGCACAATTTCATTCTTAAT-TTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGAC 78485
| || ||||| || ||| || ||| | || | |||||| ||
Sbjct 64664 GCAATGATACGGTTCTTCATGTTGTCGGA-CCAAAGTCCCATATCGACGAGATCCTTGAG 64606
Query 78486 CAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGT 78545
|| |||| | | ||| || || || ||| || || |||||||||||
Sbjct 64605 AAGCCATGGGTTGACAACTTGGAATTCTCCAGCAAGGACACGTCGAGAGTAGATGTTGGA 64546
Query 78546 CGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCAT 78605
|| || |||||||| |||||| || | || || ||| ||| || |||||
Sbjct 64545 GGTATATGGCTCGAAGCACTCGTTAAATCCAAGAATTTGACTGGTACTGGCTGTTGGCAT 64486
Query 78606 GGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT-----TAGG 78660
|| ||||| || | | || || | ||| || ||||| ||| |||
Sbjct 64485 AGGAGCGACGAGCAAACTGTTACGGATACCGTGTTGAGAGATCTGTTGCTTCAAGCTAGC 64426
Query 78661 CCG-TCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGA 78719
|| ||||||| || | | | || ||||||||||| ||| || |||| ||
Sbjct 64425 CCAATCCCAAAGATCGGTAGGTGTGACACCCCACATGTCATATTGGAGCTCGCCCTTAGA 64366
Query 78720 CGCCGGCGACCCCTTGA-ACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACT 78778
|| ||||| || |||| | ||||| || | || | ||| || | || ||||
Sbjct 64365 GGCAGGCGAGCC-TTGATAAGTCTCATATGGACCATGAATCTTTGCCAACTC-CATGGAA 64308
Query 78779 CGAG-CAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTG 78837
|| || || |||||||| | | |||||| || ||||||| | ||||
Sbjct 64307 GCAGTCAAAGCAGCGTGGTAAATGGTCTCGAAAATTTGGATGTTGAGGTGCTTGGCCTCC 64248
Query 78838 GTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATA 78897
| ||||| | ||| | || || |||| |||| || || || || || |||| |
Sbjct 64247 GGGGATTCGAAAGGAAGACGAAGAGCCAAGAAGGCATCAGCAAGACCTTGAACACCGAGA 64188
Query 78898 GCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGA 78957
|| || |||| ||| || | |||||||||| ||| | |||||| |||| |
Sbjct 64187 GCAATAGGTCTGTGACGGAAATTGCTCTTTCTTGCCTCAGGAACCGGGTAGTAGTTGACA 64128
Query 78958 TCGATGACGCGGTTCAGGTTACGCGTGACGACC-CGAGTCA--CCTCGTACAATTTGGCG 79014
||||| | |||| ||| | ||||||| | | || |||||| | || |
Sbjct 64127 TCGATAATCTTATTCAAGTT---CTTGACGACAACTTGGCAGACCTCGTGAAGCTTTTGG 64071
Query 79015 AAATCAAAAT--GATTTCCTTTGATGAAAGTCGGTAGGCACAGC----GATGCCAGGTTG 79068
|| ||| || | || | | || || | ||| || | ||| ||||||| |||
Sbjct 64070 AAGTCATAAGTGGCGGTCTTCTCATCAACATAGGTTGGGAGAGCAAGCGATGCCAAATTG 64011
Query 79069 CACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGAC 79128
|| || || ||| || || | | ||||| |||||| |||||||| || || |
Sbjct 64010 CAAACAGCGACCTCATCTGGTGCACAGTACTCGACGATTTCAGTGCACAAGTTGGAG--C 63953
Query 79129 TT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186
|| |||||| |||| ||||| ||||||||||| ||| || || |||||||| ||
Sbjct 63952 TTCGGATGGTACCGAGATTCTTTTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCA 63893
Query 79187 TGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCC 79246
|| | || | ||||||||| ||| || || | || ||| | | ||||
Sbjct 63892 TGAAAGGGTTTCCGGTCTCAGTTTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTT 63833
Query 79247 GGACAACCTTCTTGTACCGACCCTGTGC-----GAC--GTACGTCCGGTACAACTCGTTG 79299
|| ||||| ||||||| ||| ||| ||| || |||||| | | |
Sbjct 63832 TGATGC---TCTTG---CGACCCT-TGCCCTCAGACTCGTATTTCTCATACAACGCTTCG 63780
Query 79300 AAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAG 79359
|| | || || |||||||||| || || || ||||||| |||||||||| ||||
Sbjct 63779 AACTCGTCACCGTAGACATCGGCCAAACCAGGACACTCGTTAGGGCACATCAATGTCCAG 63720
Query 79360 TCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGG 79419
|| | ||| ||||| || ||||||||| || || ||||| || || ||||||
Sbjct 63719 TCGAGATTCTTTTCAACACGCTTCATGAAGAGATCTGGAATCCAGAGAGCGTAGAAGAGA 63660
Query 79420 TCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATG 79479
|| ||| ||| | |||||| | || |||||| || || ||||| || || | |
Sbjct 63659 TCACGGGCACGAACCTCCTCCTTTCCATGGTTCTTTCGGAGGTCGAGGAACTCGAAAACA 63600
Query 79480 TCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGG 79539
||||||||||| ||||| || ||||||||||| | ||| |||||| || || ||
Sbjct 63599 TCGGCGTGCCATGGCTCAAGGTAGATGGCGAAAGCACCAGGACGCTTGTTACCACCTTGA 63540
Query 79540 TTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG 79599
| || || | ||| |||||||||||||||| |||||| || ||||| |||| || |
Sbjct 63539 TCAACATATCTGGCGGTGTTGTTGAAAACTCTGAGCATAGGAACGATTCCGTTGGAGTTT 63480
Query 79600 CCGTTCGTCCCGTTGATTCGTGTACCGCTCGC-CCGAATGTTCGAGCAGTGGATTCCGAT 79658
||||| || ||| ||| | ||| |||| | || | | || || | || |||||
Sbjct 63479 CCGTTAGTACCGGCGATATAAGCGCCGGTCGCACGGATTCTGTGAACA-TTGAGACCGAT 63421
Query 79659 GCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGAT 79718
|| || | ||| || || ||||| ||| | ||| ||||| || || || ||
Sbjct 63420 ACCACCAGCATTCTTTGAAATCATGGCGCAAATCTTTAACGTGTCGTAAATACCATCAAT 63361
Query 79719 CGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGT-TGTTCGTACCGG 79777
||| |||||||| ||| ||||||||| || | |||| | || | || || |
Sbjct 63360 GCTGTCCTCCTTCATGTCGATAAGGAAGCAGGATGAAAGTTGTGCCTGTGGT-GTGCCAG 63302
Query 79778 CGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCT 79837
| ||||||||| || | ||||| |||||| | || | ||||| | ||| ||||
Sbjct 63301 CTGCGAAGAGGGTTGGGGAGGCGTGGGTGAAGTATTTGCTGGACATCAAGTTGTAGGTCT 63242
Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
| || | | || || || ||||| || |||||||| || |||||
Sbjct 63241 CGATGGCAGCCTCGATATCCTCACCGTGAATTCCGACCGCAACACGCAT 63193
Score = 197 bits (218), Expect = 2e-45
Identities = 410/603 (68%), Gaps = 8/603 (1%)
Strand=Plus/Plus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || |||||||| || || || || || || | | | |||||| ||| ||
Sbjct 63193 ATGCGTGTTGCGGTCGGAATTCACGGTGAGGATATCGAGGCTGCCATCGAGACCTACAAC 63252
Query 19178 CTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAA 19236
||||| |||| || | |||||| ||||| | || ||||| ||| || || || |
Sbjct 63253 TTGATGT-CCAGCAAATACTTCACCCACGCCTCCCCAACCCTCTTCGCAGCTGGCAC--A 63309
Query 19237 CAACCCGCAGA--TGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294
| || ||| | | || ||| ||||| | | |||||||| ||||||||||| ||
Sbjct 63310 CCACAGGCACAACTTTCATCCTGCTTCCTTATCGACATGAAGGAGGACAGCATTGATGGT 63369
Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354
|| ||||| ||| | ||| ||||| || || ||| | || |||||||| ||
Sbjct 63370 ATTTACGACACGTTAAAGATTTGCGCCATGATTTCAAAGAATGCTGGTGGTATCGGTCTC 63429
Query 19355 CACTGCTCGAATA-TCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413
| || || | | |||| ||| || | ||| || || |||||| || |
Sbjct 63430 AA-TGTTCACAGAATCCGTGCGACCGGCGCTTATATCGCCGGTACTAACGGAAACTCCAA 63488
Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473
||| ||||| || |||||| | || ||||||||||| ||||| || || | || || ||
Sbjct 63489 CGGAATCGTTCCTATGCTCAGAGTTTTCAACAACACCGCCAGATATGTTGATCAAGGTGG 63548
Query 19474 CGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533
||| || || | |||||||||||||| |||||||||||||| || || | ||
Sbjct 63549 TAACAAGCGTCCTGGTGCTTTCGCCATCTACCTTGAGCCATGGCACGCCGATGTTTTCGA 63608
Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593
|||||||| || || |||||| || | |||||| | || || || ||||||
Sbjct 63609 GTTCCTCGACCTCCGAAAGAACCATGGAAAGGAGGAGGTTCGTGCCCGTGATCTCTTCTA 63668
Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653
|| | |||||||| || || |||||| || ||||| ||| | || ||| |
Sbjct 63669 CGCTCTCTGGATTCCAGATCTCTTCATGAAGCGTGTTGAAAAGAATCTCGACTGGACATT 63728
Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTT 19713
||||||||| |||| || ||||| | |||| |||||||| || | |||| | | |||
Sbjct 63729 GATGTGCCCTAACGAGTGTCCTGGTTTGGCCGATGTCTACGGTGACGAGTTCGAAGCGTT 63788
Query 19714 GTA 19716
|||
Sbjct 63789 GTA 63791
>seq908
Length=77775
Score = 125 bits (138), Expect = 8e-24
Identities = 306/455 (67%), Gaps = 18/455 (4%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
||||| |||||||| | || || || || || || ||||||||| ||| || |||
Sbjct 45139 TTTGCCCAACGTCTTGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTC 45198
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| || |||||| | || || |||||||||||| | || || | ||||||||||||
Sbjct 45199 GCCTCCATCTTCTGGTTGAAGAAACGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAG 45258
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152
||||| ||||| || ||||| ||||| || || ||| || | ||| || | || |
Sbjct 45259 CTGATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCA-TG-CCTTCTCTT--CTCCCA 45314
Query 60153 TTGGAAAAAT-GCCCTTCCAAGGATATTCACAAGATTGT--TCAGTG-GGCTTGTGAAGT 60208
|| ||| || |||| ||||| | | || || ||| | |||| ||| |
Sbjct 45315 TTTGAAGCATCGCCCAAGCAAGGCTGCAGTCCAGGCCGTCATCACCGAGGCTGTTGAGAT 45374
Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268
||| |||||| | || || || ||||| || ||| | || ||| ||||
Sbjct 45375 TGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCACTTCTCGGCATGAACGCCAACCT 45434
Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCG---CCTCATGGCC--CAGTTTGGAGAA 60323
|||| ||| |||||| |||| ||||| || || |||| | || | | |||||
Sbjct 45435 GATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTCCTCCTTTCCCTCGGCAATGAGAA 45494
Query 60324 GGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGG 60383
|| ||||| || ||||| ||||||| ||||||| |||||| | | ||
Sbjct 45495 GG-----TTTACAAGGTTGCCAACCCATTCGACTTTATGGAGAACATCTCCCTTGCCGGA 45549
Query 60384 AAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
|||||||||||||| |||||||| || | |||||
Sbjct 45550 AAGACCAACTTCTTCGAGAAGCGTGTTGCTGATTA 45584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548513047856160
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