Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq843 269 4e-67
>seq843
Length=104768
Score = 269 bits (298), Expect = 4e-67
Identities = 1116/1745 (64%), Gaps = 33/1745 (2%)
Strand=Plus/Minus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||| ||||||||||| ||||| || |||||||| |||| || ||||||||| ||
Sbjct 64904 GTACGGAGATAGTACATTCCAGTCTTGAGACCCAGCTTCCAGCCTGCGAAATGCATACTG 64845
Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931
|| | || | || || || || || ||||| || ||| |||||| |||
Sbjct 64844 GTGATCTTACCCATGGTTGGGTCCTTCATGTGGATGTTCATTGATTGAGATTGATCAATG 64785
Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991
|| || || | || || ||||| | | ||||| ||| | || ||||||| ||
Sbjct 64784 AATGCACCACGGTCGGCAGCCATCTGGACGATGGTACGTTGCGAGATCTCCCAAACGGTC 64725
Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCT 77048
||| ||| ||||||||| | || | ||||| | ||||| || || ||||||||
Sbjct 64724 TTGTAAAGAGCCTTGATATCAGCCGGGATGTTTGGAACATTTTGGATTGATCCACCATCA 64665
Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108
| || || ||||| || | || ||| | | | | || | | | | ||
Sbjct 64664 GCAATGATACGGTTCTTCATGTTGTCGGACCAAAGTCCCATATCGACGAGATCCTTGAGA 64605
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| || || || | ||| |||||||||| | || | |||| ||| || || |
Sbjct 64604 AGCCATGGGTTGACAACTTGGAATTCTCCAGCAAGGACACGTCGAGAGTAGATGTTGGAG 64545
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|||||||| || | | || || ||| | ||||||| ||| || |||||||||
Sbjct 64544 GTATATGGCTCGAAGCACTCGTTAAATCCAAGAATTTGACTGGTACTGGCTGTTGGCATA 64485
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTAT-CTTTTAGATATTT 77287
|| || || | ||||| || | || ||| ||| ||| | | ||| || ||
Sbjct 64484 GGAGCGACGAGCAAACTGTTACGGATACCGTGTTGAGAGATCTGTTGCTTCAAGCTAGC- 64426
Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347
||||||||||||||| | |||| ||| |||| | || ||||| || || |||
Sbjct 64425 CCAATCCCAAAGATCGGTAGGTGTGACACCCCACATGTCATATTGGAGCTCGCCCTTAGA 64366
Query 77348 AGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGC 77407
||| || || | ||| || ||||| || || | | | || | || ||
Sbjct 64365 GGCAGGCGAGCCTTGATAAGTCTCATATGGACCATGAATCTTTGCCAACTCCATGGAAGC 64306
Query 77408 TTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAA 77466
||| || ||| ||||| || |||||||| | | ||||| | |||| || |
Sbjct 64305 AGTCAAAGCAGCGTGGTAAATGGTCTCGAAAATTTGGATGTTGAGGTGCTTGGCCTCCGG 64246
Query 77467 TACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATAC 77526
| || || ||| | | | | | |||||||| || | || ||||| || | |
Sbjct 64245 GGAT-TCGAAAGGAAGACGAAGAGCCAAGAAGGCATCAGCAAGACCTTGAACACCGAGAG 64187
Query 77527 CAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGT 77586
|||||||||| || | |||| || | || || |||| || || || || | |
Sbjct 64186 CAATAGGTCTGTGACGGAAATTGCTCTTTCTTGCCTCAGGAACCGGGTAGTAGTTGACAT 64127
Query 77587 CTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT 77646
| ||||| ||||| | || | || || |||| || || | || || | || |
Sbjct 64126 CGATAATCTTATTCAAGTTCTTGACGACAACTTGGCAGACCTCGTGAAGCTTTTGGAAGT 64067
Query 77647 CAAA--------TCTTC-CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697
|| | ||||| |||| |||| | | | ||| | ||||| | ||| |
Sbjct 64066 CATAAGTGGCGGTCTTCTCATC---AACATAGGTTGGGAGAGCAAGCGATGCCAAATTGC 64010
Query 77698 AAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACATAGATTACTACAT 77756
|||| || ||||||| | || || || | | || || || || | || | |
Sbjct 64009 AAACAGCGACCTCATCTG-GTGCACAGTACTCGACGATTTCAGTGCACAAGTTGGAGCTT 63951
Query 77757 TTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATA 77816
||| || || ||||| | ||||||||||||| ||||| | ||||| ||||| ||
Sbjct 63950 CGGATGGTACCGAGATTCTTTTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATG 63891
Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 77876
|| || | ||||| ||| | || | || | ||||| | ||| | | |||||
Sbjct 63890 AAAGGGTTTCCGGTCTCAGTTTGAGCCTCAAGGATAGAGTACCAAAGCTTTTGGGCTTTG 63831
Query 77877 ATCATAGATTTGTATCGCCT---CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCA 77933
|| | ||| | | | ||| || |||| ||| | | ||| || ||
Sbjct 63830 ATGCTC---TTGCGACCCTTGCCCTCAGACTCGTATTTCTCATACAACGCTTCGAACTCG 63774
Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993
|| || | ||||| |||| ||||| || || || ||||||||||||| |||||| |
Sbjct 63773 TCACCGTAGACATCGGCCAAACCAGGACACTCGTTAGGGCACATCAATGTCCAGTCGAGA 63714
Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053
| | | ||| || ||||| |||||||| || ||||| ||||| || ||||| |||
Sbjct 63713 TTCTTTTCAACACGCTTCATGAAGAGATCTGGAATCCAGAGAGCGTAGAAGAGATCACGG 63654
Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113
| | | || || ||||| |||||| || ||||| ||||| | || ||| |
Sbjct 63653 GCACGAACCTCCTCCTTTCCATGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCG 63594
Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173
|||||||| || || || || || | | | ||||| || || ||||| || ||||| | |
Sbjct 63593 TGCCATGGCTCAAGGTAGATGGCGAAAGCACCAGGACGCTTGTTACCACCTTGATCAACA 63534
Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233
|||||||||||||| || ||||||| | ||| |||| || ||||| || |||| ||
Sbjct 63533 TATCTGGCGGTGTTGTTGAAAACTCTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTA 63474
Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA--ATGGATATCCCTATTCCTC 78291
|| || | |||||| || | || || || | | || || | || || || |
Sbjct 63473 GTACCGGCGATATAAGCGCCGGTCGCACGGATTCTGTGAACATTGAGA--CCGATACCAC 63416
Query 78292 CTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGT 78351
| || |||| || || | |||||| || || || ||||| ||||| || || ||||
Sbjct 63415 CAGCATTCTTTGAAATCATGGCGCAAATCTTTAACGTGTCGTAAATACCATCAATGCTGT 63356
Query 78352 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 78411
| ||| |||||| | ||| || ||| || | ||| || || || || |
Sbjct 63355 CCTCCTTCATGTCGATAAGGAAGCAGGATGAAAGTTGTGCCTGTGGTGTGCCAGCTGCGA 63296
Query 78412 ATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAG 78471
| | || || || || || || || |||| || | | ||||| || || || |
Sbjct 63295 AGAGGGTTGGGGAGGCGTGGGTGAAGTATTTGCTGGACATCAAGTTGTAGGTCTCGATGG 63236
Query 78472 CTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGT 78530
| | || || ||| || | |||||||| ||||| |||||||| | ||||||||| ||
Sbjct 63235 CAGCCTCGATATCCTCACCG-TGAATTCCGACCGCAACACGCATAATCATATGCTGTGGA 63177
Query 78531 CTTTC 78535
| |||
Sbjct 63176 CGTTC 63172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694653916720960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |